Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU713288 |
| length | 205 |
| lncRNA type | inter_gene |
| GC content | 0.60 |
| exon number | 1 |
| gene id | G627295 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 56814597 ~ 56814801 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU713274 | lncRNA | downstream | 64136 | 56748725 ~ 56750461 (-) | True | G627281 |
| TU713108 | lncRNA | downstream | 294677 | 56482373 ~ 56519920 (-) | True | tfeb |
| TU713155 | lncRNA | downstream | 317965 | 56495308 ~ 56496632 (-) | True | G627175 |
| TU713145 | lncRNA | downstream | 322641 | 56491664 ~ 56491956 (-) | True | G627172 |
| TU712297 | lncRNA | downstream | 387638 | 56426750 ~ 56426959 (-) | True | G626402 |
| TU713295 | lncRNA | upstream | 2501 | 56817302 ~ 56817561 (-) | True | G627300 |
| TU713300 | lncRNA | upstream | 8319 | 56823120 ~ 56823415 (-) | True | G627305 |
| TU713301 | lncRNA | upstream | 9924 | 56824725 ~ 56825042 (-) | True | G627306 |
| TU713302 | lncRNA | upstream | 11234 | 56826035 ~ 56826313 (-) | True | G627307 |
| TU713303 | lncRNA | upstream | 12391 | 56827192 ~ 56829036 (-) | True | G627308 |
| XM_021609811.2 | mRNA | downstream | 8584 | 56796848 ~ 56806013 (-) | True | psma5 |
| XM_036983590.1 | mRNA | downstream | 17993 | 56772815 ~ 56796604 (-) | True | sort1a |
| XM_021609810.2 | mRNA | downstream | 18313 | 56772815 ~ 56796284 (-) | False | sort1a |
| XM_021609807.2 | mRNA | downstream | 42171 | 56757066 ~ 56772426 (-) | True | mdm4 |
| XM_021609808.2 | mRNA | downstream | 42172 | 56757066 ~ 56772425 (-) | False | mdm4 |
| XM_021609813.2 | mRNA | upstream | 39010 | 56853811 ~ 56869607 (-) | False | vamp3 |
| XM_036983592.1 | mRNA | upstream | 66530 | 56881331 ~ 57017276 (-) | False | LOC110528035 |
| XM_036983593.1 | mRNA | upstream | 66530 | 56881331 ~ 57017276 (-) | False | LOC110528035 |
| XM_036983594.1 | mRNA | upstream | 66530 | 56881331 ~ 57017276 (-) | False | LOC110528035 |
| XM_036983595.1 | mRNA | upstream | 66530 | 56881331 ~ 57017276 (-) | False | LOC110528035 |
| TU713244 | other | downstream | 118506 | 56691323 ~ 56696091 (-) | True | G627254 |
| TU711411 | other | downstream | 1380525 | 55433456 ~ 55434072 (-) | True | LOC110528020 |
| TU711245 | other | downstream | 1642397 | 55164492 ~ 55172200 (-) | False | G625472 |
| TU711185 | other | downstream | 1739201 | 55072479 ~ 55075396 (-) | True | G625426 |
| TU708601 | other | downstream | 3491766 | 53305536 ~ 53322831 (-) | True | G622985 |
| TU713310 | other | upstream | 19784 | 56834585 ~ 56835092 (-) | True | G627314 |
| TU713320 | other | upstream | 32161 | 56846962 ~ 56852301 (-) | True | G627323 |
| TU713292 | other | upstream | 38766 | 56853567 ~ 56869375 (-) | False | vamp3 |
| TU713290 | other | upstream | 39016 | 56853817 ~ 56869375 (-) | False | vamp3 |
| TU713291 | other | upstream | 39016 | 56853817 ~ 56869451 (-) | True | vamp3 |
