Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU713343 |
| length | 249 |
| lncRNA type | intronic |
| GC content | 0.37 |
| exon number | 2 |
| gene id | G627346 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 56904400 ~ 56904778 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU713340 | lncRNA | downstream | 5865 | 56898092 ~ 56898535 (-) | True | G627343 |
| TU713339 | lncRNA | downstream | 7403 | 56896251 ~ 56896997 (-) | True | G627342 |
| TU713313 | lncRNA | downstream | 62271 | 56840579 ~ 56842129 (-) | True | G627316 |
| TU713309 | lncRNA | downstream | 69308 | 56834350 ~ 56835092 (-) | False | G627314 |
| TU713308 | lncRNA | downstream | 70108 | 56833973 ~ 56834292 (-) | True | G627313 |
| TU713409 | lncRNA | upstream | 79566 | 56984344 ~ 56987712 (-) | True | G627408 |
| TU713434 | lncRNA | upstream | 117111 | 57021889 ~ 57022773 (-) | True | G627432 |
| TU713381 | lncRNA | upstream | 128072 | 57032850 ~ 57034989 (-) | True | G627381 |
| TU713383 | lncRNA | upstream | 132025 | 57036803 ~ 57039929 (-) | True | phf13 |
| TU713377 | lncRNA | upstream | 149610 | 57054388 ~ 57058570 (-) | True | LOC110528040 |
| XM_021609813.2 | mRNA | downstream | 34793 | 56853811 ~ 56869607 (-) | False | vamp3 |
| XM_021609811.2 | mRNA | downstream | 98387 | 56796848 ~ 56806013 (-) | True | psma5 |
| XM_036983590.1 | mRNA | downstream | 107796 | 56772815 ~ 56796604 (-) | True | sort1a |
| XM_021609810.2 | mRNA | downstream | 108116 | 56772815 ~ 56796284 (-) | False | sort1a |
| XM_021609807.2 | mRNA | downstream | 131974 | 56757066 ~ 56772426 (-) | True | mdm4 |
| XM_021609819.2 | mRNA | upstream | 133646 | 57038424 ~ 57043462 (-) | False | phf13 |
| XM_021609820.2 | mRNA | upstream | 133646 | 57038424 ~ 57046463 (-) | False | phf13 |
| XM_021609822.2 | mRNA | upstream | 151626 | 57056404 ~ 57058621 (-) | False | LOC110528040 |
| XM_036983600.1 | mRNA | upstream | 151626 | 57056404 ~ 57059527 (-) | False | LOC110528040 |
| XM_021609823.2 | mRNA | upstream | 362664 | 57267442 ~ 57305408 (-) | False | cdc42 |
| TU713291 | other | downstream | 34949 | 56853817 ~ 56869451 (-) | True | vamp3 |
| TU713292 | other | downstream | 35025 | 56853567 ~ 56869375 (-) | False | vamp3 |
| TU713290 | other | downstream | 35025 | 56853817 ~ 56869375 (-) | False | vamp3 |
| TU713320 | other | downstream | 52099 | 56846962 ~ 56852301 (-) | True | G627323 |
| TU713310 | other | downstream | 69308 | 56834585 ~ 56835092 (-) | True | G627314 |
| TU713380 | other | upstream | 147413 | 57052191 ~ 57058570 (-) | False | LOC110528040 |
| TU714707 | other | upstream | 967272 | 57872050 ~ 57873331 (-) | True | G628575 |
| TU714864 | other | upstream | 1212412 | 58117190 ~ 58118122 (-) | True | G628714 |
| TU715047 | other | upstream | 1521397 | 58426175 ~ 58429371 (-) | False | LOC110528069 |
| TU715184 | other | upstream | 1787039 | 58691817 ~ 58694489 (-) | False | LOC110528083 |
