RNA id: TU717655



Basic Information


Item Value
RNA id TU717655
length 263
lncRNA type inter_gene
GC content 0.46
exon number 1
gene id G631214
representative True

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 60829386 ~ 60829648 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ctctagacccaaactgctacagacctatatctatcctaccctgtctttctaaggtcttcgaaagccaagttaacaaacagatcactgaccattttgaatcccaccataccttctccgctatgcaatctggtttcagagttgGTCATGGTTGTACCTCAGCCACGATCAAGGTTCTACacaacatcataaccgccatcgataagagacattactgtgcagccgtattcatcgacctggccacggctttcgactctgtcaatcac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU717563 lncRNA downstream 73942 60753024 ~ 60755444 (-) True LOC110528989
TU717567 lncRNA downstream 126772 60699480 ~ 60702614 (-) False LOC110528989
TU717315 lncRNA downstream 253910 60488050 ~ 60575476 (-) True G630902
TU717358 lncRNA downstream 265999 60561507 ~ 60563387 (-) True LOC100136654
TU717297 lncRNA downstream 458934 60370161 ~ 60370452 (-) True G630886
TU717679 lncRNA upstream 17352 60847000 ~ 60847202 (-) True G631238
TU717694 lncRNA upstream 25783 60855431 ~ 60855779 (-) True G631253
TU717763 lncRNA upstream 56151 60885799 ~ 60888175 (-) True G631321
TU717867 lncRNA upstream 115473 60945121 ~ 60945582 (-) True G631414
TU717871 lncRNA upstream 121081 60950729 ~ 60951670 (-) True G631417
XM_036983697.1 mRNA downstream 6861 60699279 ~ 60822525 (-) False LOC110528989
XM_036983693.1 mRNA downstream 6862 60699279 ~ 60822524 (-) False LOC110528989
XM_036983694.1 mRNA downstream 6862 60699279 ~ 60822524 (-) False LOC110528989
XM_036983695.1 mRNA downstream 6862 60699279 ~ 60822524 (-) False LOC110528989
XM_036983696.1 mRNA downstream 6862 60699279 ~ 60822524 (-) False LOC110528989
XM_021609979.2 mRNA upstream 100653 60930301 ~ 60933747 (-) True LOC110528153
XM_021609980.2 mRNA upstream 116416 60946064 ~ 61041619 (-) False LOC110528154
XM_036983701.1 mRNA upstream 116980 60946628 ~ 60969307 (-) False LOC110528154
XM_021609981.2 mRNA upstream 116980 60946628 ~ 61041551 (-) False LOC110528154
XM_036983700.1 mRNA upstream 116980 60946628 ~ 61041574 (-) True LOC110528154
TU717562 other downstream 81287 60738495 ~ 60748099 (-) False LOC110528989
TU717152 other downstream 745529 60083046 ~ 60083857 (-) True G630747
TU716577 other downstream 911835 59915979 ~ 59917551 (-) False G630227
TU718213 other upstream 361060 61190708 ~ 61191045 (-) True G631740
TU718160 other upstream 368359 61198007 ~ 61199438 (-) True G631687
TU718974 other upstream 861600 61691248 ~ 61691644 (-) True G632459
TU719566 other upstream 1391624 62221272 ~ 62221678 (-) False G632994
TU719571 other upstream 1391624 62221272 ~ 62222050 (-) False G632994

Expression Profile