RNA id: TU721910



Basic Information


Item Value
RNA id TU721910
length 239
lncRNA type inter_gene
GC content 0.49
exon number 1
gene id G635079
representative True

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 63837064 ~ 63837302 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


cgcaggcagaacagttgaaactggagcagcagcacggccaggtggactggggacagcaaggagtcatcatgccaggtagtcctgaggctcaggtcctccgcgagagagaaagaaagagagaattggagagagcatacttaaattcacacaggacaccagataagacaggagaagtactccagatataacaaactgactctagcccctcaacacataaactactgcagcataaatattgg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU721880 lncRNA downstream 41735 63785799 ~ 63795329 (-) True LOC110528212
TU721768 lncRNA downstream 209601 63627102 ~ 63627463 (-) True G634962
TU721761 lncRNA downstream 223299 63613524 ~ 63613765 (-) True G634955
TU721757 lncRNA downstream 226472 63610347 ~ 63610592 (-) True G634951
TU721755 lncRNA downstream 228191 63608648 ~ 63608873 (-) True G634949
TU721911 lncRNA upstream 655 63837957 ~ 63838183 (-) True G635080
TU721913 lncRNA upstream 2442 63839744 ~ 63839951 (-) True G635082
TU721915 lncRNA upstream 5028 63842330 ~ 63842553 (-) True G635084
TU722032 lncRNA upstream 200261 64037563 ~ 64037887 (-) True G635186
TU722033 lncRNA upstream 201254 64038556 ~ 64038827 (-) True G635187
XM_036983747.1 mRNA downstream 9517 63785777 ~ 63827547 (-) False LOC110528212
XM_036983750.1 mRNA downstream 9517 63785777 ~ 63827547 (-) False LOC110528212
XM_036983751.1 mRNA downstream 9517 63785777 ~ 63827547 (-) False LOC110528212
XM_036983753.1 mRNA downstream 9517 63785777 ~ 63827547 (-) False LOC110528212
XM_036983754.1 mRNA downstream 9517 63785777 ~ 63827547 (-) False LOC110528212
XM_036983805.1 mRNA upstream 63635 63900937 ~ 63962551 (-) False LOC110528215
XM_021610074.2 mRNA upstream 63635 63900937 ~ 63962763 (-) False LOC110528215
XR_005052634.1 mRNA upstream 63774 63901076 ~ 63962763 (-) False LOC110528215
XR_005052635.1 mRNA upstream 63896 63901198 ~ 63962763 (-) False LOC110528215
XM_036983806.1 mRNA upstream 64103 63901405 ~ 63962763 (-) False LOC110528215
TU721875 other downstream 44284 63785772 ~ 63792780 (-) False LOC110528212
TU721871 other downstream 45232 63785799 ~ 63791832 (-) False LOC110528212
TU720546 other downstream 829024 63006775 ~ 63008040 (-) True si:dkey-28n18.9
TU719986 other downstream 1316554 62508219 ~ 62520510 (-) True LOC118965309
TU719571 other downstream 1615014 62221272 ~ 62222050 (-) False G632994
TU722010 other upstream 157214 63994516 ~ 63997239 (-) True LOC110528216
TU722013 other upstream 195144 64032446 ~ 64035381 (-) True G635167
TU723004 other upstream 480892 64318194 ~ 64326230 (-) False G636055
TU723007 other upstream 480892 64318194 ~ 64326230 (-) False G636055
TU723011 other upstream 480892 64318194 ~ 64326230 (-) False G636055

Expression Profile