RNA id: TU722032



Basic Information


Item Value
RNA id TU722032
length 325
lncRNA type inter_gene
GC content 0.51
exon number 1
gene id G635186
representative True

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 64037563 ~ 64037887 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


cagatccacagatgacgcaatctcaatcgcactccacactgccctttcccacctggacaaaacgaacacctatgtgagaatgctgttcattgactacagctcagcgttcaacaacatagCTTATTGATCAGCTTTGTGggcactaaggaccctgggactaaacacctccctctgcaactggatcatggaaTTCATGACGGggcaccccaggtggtaagggtatgcaacaacacatcaggggtgcgtgcttggttccctcctgtactccctgttcacccacacctGGGTGACCAAGCACGAATCCAACaccctcattaagtttgct

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU721915 lncRNA downstream 195010 63842330 ~ 63842553 (-) True G635084
TU721913 lncRNA downstream 197612 63839744 ~ 63839951 (-) True G635082
TU721911 lncRNA downstream 199380 63837957 ~ 63838183 (-) True G635080
TU721910 lncRNA downstream 200261 63837064 ~ 63837302 (-) True G635079
TU721880 lncRNA downstream 242234 63785799 ~ 63795329 (-) True LOC110528212
TU722033 lncRNA upstream 669 64038556 ~ 64038827 (-) True G635187
TU722099 lncRNA upstream 95317 64133204 ~ 64140851 (-) True G635244
TU722101 lncRNA upstream 99114 64137001 ~ 64144757 (-) True G635246
TU722160 lncRNA upstream 193863 64231750 ~ 64252302 (-) True LOC110528224
TU722161 lncRNA upstream 234894 64272781 ~ 64274350 (-) True LOC110528997
XM_021610077.2 mRNA downstream 792 63993536 ~ 64036771 (-) False LOC110528216
XM_021610076.2 mRNA downstream 13833 63993536 ~ 64023730 (-) False LOC110528216
XM_021610075.2 mRNA downstream 13835 63993536 ~ 64023728 (-) False LOC110528216
XM_021610074.2 mRNA downstream 74800 63900937 ~ 63962763 (-) False LOC110528215
XR_005052634.1 mRNA downstream 74800 63901076 ~ 63962763 (-) False LOC110528215
XM_036983809.1 mRNA upstream 12777 64050664 ~ 64065462 (-) False LOC110528217
XM_036983810.1 mRNA upstream 12777 64050664 ~ 64065789 (-) False LOC110528217
XM_036983811.1 mRNA upstream 12777 64050664 ~ 64083358 (-) True LOC110528217
XM_021610095.2 mRNA upstream 195279 64233166 ~ 64252381 (-) False LOC110528224
XM_036983813.1 mRNA upstream 195279 64233166 ~ 64252405 (-) False LOC110528224
TU722013 other downstream 2182 64032446 ~ 64035381 (-) True G635167
TU722010 other downstream 40324 63994516 ~ 63997239 (-) True LOC110528216
TU721875 other downstream 244783 63785772 ~ 63792780 (-) False LOC110528212
TU721871 other downstream 245731 63785799 ~ 63791832 (-) False LOC110528212
TU720546 other downstream 1029523 63006775 ~ 63008040 (-) True si:dkey-28n18.9
TU723004 other upstream 280307 64318194 ~ 64326230 (-) False G636055
TU723007 other upstream 280307 64318194 ~ 64326230 (-) False G636055
TU723011 other upstream 280307 64318194 ~ 64326230 (-) False G636055
TU723012 other upstream 280307 64318194 ~ 64326230 (-) False G636055
TU723015 other upstream 280307 64318194 ~ 64326230 (-) True G636055

Expression Profile