RNA id: TU724804



Basic Information


Item Value
RNA id TU724804
length 214
lncRNA type intronic
GC content 0.46
exon number 1
gene id G637665
representative True

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 66171969 ~ 66172182 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gaggatcggtaggatagtcagttttactagggtaagtttggcggcgtgagtgaaggaggctttgttgcggaatagaaagccgactctagatctgattttagattggagatgtttgatatgagtctggacgGAGAGtttagtctagccagacacctaggtacatatagatgtccacatattctaggtcggaaccatccagggtggtgatgctagt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU724802 lncRNA downstream 2291 66169360 ~ 66169678 (-) True G637663
TU724799 lncRNA downstream 8761 66162994 ~ 66163208 (-) True G637660
TU724771 lncRNA downstream 32168 66136462 ~ 66139801 (-) True G637632
TU724773 lncRNA downstream 38012 66132464 ~ 66133957 (-) True G637634
TU724732 lncRNA downstream 106488 66039202 ~ 66065481 (-) False G637595
TU724817 lncRNA upstream 3778 66175960 ~ 66177895 (-) False G637669
TU724821 lncRNA upstream 5858 66178040 ~ 66178241 (-) True G637670
TU724830 lncRNA upstream 16921 66189103 ~ 66189310 (-) True G637679
TU724841 lncRNA upstream 27665 66199847 ~ 66200374 (-) True G637690
TU724843 lncRNA upstream 32945 66205127 ~ 66205365 (-) True G637692
XM_021610244.2 mRNA downstream 13296 66140229 ~ 66158673 (-) False LOC110528295
XM_021610240.2 mRNA downstream 39769 66127919 ~ 66132200 (-) True LOC110528292
LOC110529002 mRNA upstream 41679 66213861 ~ 66216016 (-) True LOC110529002
XM_036983880.1 mRNA upstream 51410 66223592 ~ 66274896 (-) False LOC110528298
XM_021610246.2 mRNA upstream 51410 66223592 ~ 66275633 (-) False LOC110528298
XM_036983879.1 mRNA upstream 51410 66223592 ~ 66275633 (-) False LOC110528298
XM_021611154.2 mRNA upstream 121104 66293286 ~ 66297208 (-) True LOC110529003
TU724622 other downstream 279567 65886936 ~ 65892402 (-) True G637504
TU724613 other downstream 289413 65881012 ~ 65882556 (-) True G637495
TU723769 other downstream 676812 65493790 ~ 65495157 (-) True G636719
TU723574 other downstream 935088 65234484 ~ 65236881 (-) True G636571
TU723536 other downstream 1036174 65135538 ~ 65135795 (-) True G636533
TU724820 other upstream 3778 66175960 ~ 66177895 (-) True G637669
TU724874 other upstream 104600 66276782 ~ 66277080 (-) True G637722
TU726292 other upstream 883472 67055654 ~ 67079059 (-) True LOC110528300
TU726459 other upstream 1074450 67246632 ~ 67275540 (-) True LOC110528308
TU726566 other upstream 1242674 67414856 ~ 67416090 (-) True G639226

Expression Profile