RNA id: TU736362



Basic Information


Item Value
RNA id TU736362
length 290
lncRNA type antisense_over
GC content 0.43
exon number 1
gene id G647919
representative True

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 75160334 ~ 75160623 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


TGACAGTATCTCTTCTATCCCGCTGaatttttcttcacatttttctTTATAATCCAGTCCAGATAAATTCCATTTgactccagagagagaggggtcttcTTGCCATGTTTCTCAATAGCTAAGTTCCTGCCATCAATAAAGGAAGGTCCACATCACAGTTAGTGGTCTGCGACCCAGAATAAGAAGGAAAACTCCCATTCGTTAGTGGCTTTCCCGTTTCAGTGAGTTGAGCTCAGAGCTGTGAAGTGTCTAGCTGCCTATTGCTTCACTGGCTCAACGTTTCAGCTTCT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU736361 lncRNA downstream 818 75159317 ~ 75159516 (-) True G647918
TU736360 lncRNA downstream 1686 75158317 ~ 75158648 (-) True G647917
TU736142 lncRNA downstream 11854 75148010 ~ 75148480 (-) True G647721
TU736134 lncRNA downstream 19717 75140408 ~ 75140617 (-) True G647715
TU735874 lncRNA downstream 104789 74902964 ~ 75055545 (-) True LOC110528483
TU736365 lncRNA upstream 2376 75162999 ~ 75163210 (-) True G647922
TU736370 lncRNA upstream 9701 75170324 ~ 75170551 (-) True G647927
TU736431 lncRNA upstream 72890 75233513 ~ 75247953 (-) True G647966
TU736440 lncRNA upstream 86445 75247068 ~ 75257239 (-) True G647975
TU736442 lncRNA upstream 100915 75261538 ~ 75264089 (-) True G647976
XR_002474264.2 mRNA downstream 52410 75107013 ~ 75107924 (-) False LOC110528488
XM_036984062.1 mRNA downstream 104603 74845476 ~ 75055731 (-) False LOC110528483
XM_036984063.1 mRNA downstream 104603 74845476 ~ 75055731 (-) False LOC110528483
XM_036984061.1 mRNA downstream 323108 74829699 ~ 74837226 (-) True LOC110528482
XM_021610582.2 mRNA downstream 323195 74829699 ~ 74837139 (-) False LOC110528482
XM_021610591.2 mRNA upstream 116158 75276781 ~ 75314879 (-) True LOC110528489
XM_021608291.2 mRNA upstream 231081 75391704 ~ 75392659 (-) True LOC110527148
XM_021610592.2 mRNA upstream 324686 75485309 ~ 75491381 (-) False LOC110528490
XM_021610593.2 mRNA upstream 324686 75485309 ~ 75491382 (-) True LOC110528490
XM_036984066.1 mRNA upstream 369754 75530377 ~ 75542507 (-) False LOC110528491
TU736097 other downstream 52418 75106897 ~ 75107916 (-) True LOC110528488
TU734363 other downstream 1348877 73810902 ~ 73811457 (-) True G646073
TU734207 other downstream 1465409 73694573 ~ 73694925 (-) True G645928
TU733633 other downstream 1949910 73207960 ~ 73210424 (-) True gnrh2
TU733350 other downstream 2441885 72717746 ~ 72718449 (-) True G645156
TU737600 other upstream 458702 75619325 ~ 75620937 (-) False G649025
TU737941 other upstream 1054078 76214701 ~ 76220931 (-) False G649327
TU737942 other upstream 1054078 76214701 ~ 76215513 (-) True G649327
TU738321 other upstream 1852805 77013428 ~ 77016601 (-) False G649684
TU738738 other upstream 2222044 77382667 ~ 77382936 (-) True LOC110529034

Expression Profile