RNA id: TU736570



Basic Information


Item Value
RNA id TU736570
length 233
lncRNA type inter_gene
GC content 0.41
exon number 1
gene id G648097
representative True

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 75454439 ~ 75454671 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


tctgtcttacaatctctctccaccaggtgtagcacttctcccatcctttaaaaacaagaaatggacagtgactggggtaagggggggatacctagtcattttttgcatcatcattgcatgcgatcatcattctcaaagccgctgtttacttctgaagaaCACTTTAGCACCGTCCTAAAAACCTGATTCAAAtttgacacaaaccttcaaataggtatgtaatgacacgttat

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU736546 lncRNA downstream 31558 75422046 ~ 75422881 (-) True G648074
TU736547 lncRNA downstream 32997 75419167 ~ 75421442 (-) True G648075
TU736513 lncRNA downstream 85593 75363442 ~ 75368846 (-) True G648045
TU736442 lncRNA downstream 190350 75261538 ~ 75264089 (-) True G647976
TU736440 lncRNA downstream 197200 75247068 ~ 75257239 (-) True G647975
TU736587 lncRNA upstream 9779 75464450 ~ 75464769 (-) True G648114
TU737553 lncRNA upstream 29263 75483934 ~ 75484191 (-) True G648983
TU737554 lncRNA upstream 34264 75488935 ~ 75540391 (-) False G648984
TU737556 lncRNA upstream 34264 75488935 ~ 75540253 (-) True G648984
TU737542 lncRNA upstream 82490 75537161 ~ 75591273 (-) True G648972
XM_021608291.2 mRNA downstream 61780 75391704 ~ 75392659 (-) True LOC110527148
XM_021610591.2 mRNA downstream 139560 75276781 ~ 75314879 (-) True LOC110528489
XR_002474264.2 mRNA downstream 346515 75107013 ~ 75107924 (-) False LOC110528488
XM_036984062.1 mRNA downstream 398708 74845476 ~ 75055731 (-) False LOC110528483
XM_021610592.2 mRNA upstream 30638 75485309 ~ 75491381 (-) False LOC110528490
XM_021610593.2 mRNA upstream 30638 75485309 ~ 75491382 (-) True LOC110528490
XM_036984066.1 mRNA upstream 75706 75530377 ~ 75542507 (-) False LOC110528491
XM_036984067.1 mRNA upstream 75706 75530377 ~ 75542507 (-) False LOC110528491
XM_036984068.1 mRNA upstream 80976 75535647 ~ 75542505 (-) True LOC110528491
TU736097 other downstream 346523 75106897 ~ 75107916 (-) True LOC110528488
TU734363 other downstream 1642982 73810902 ~ 73811457 (-) True G646073
TU734207 other downstream 1759514 73694573 ~ 73694925 (-) True G645928
TU733633 other downstream 2244015 73207960 ~ 73210424 (-) True gnrh2
TU733350 other downstream 2735990 72717746 ~ 72718449 (-) True G645156
TU737600 other upstream 164654 75619325 ~ 75620937 (-) False G649025
TU737941 other upstream 760030 76214701 ~ 76220931 (-) False G649327
TU737942 other upstream 760030 76214701 ~ 76215513 (-) True G649327
TU738321 other upstream 1558757 77013428 ~ 77016601 (-) False G649684
TU738738 other upstream 1927996 77382667 ~ 77382936 (-) True LOC110529034

Expression Profile