RNA id: TU744821



Basic Information


Item Value
RNA id TU744821
length 335
RNA type TUCP
GC content 0.46
exon number 2
gene id G655289
representative True

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 81515537 ~ 81516722 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


atattcaggggggtactggtacagagtcaatatggaggctatatacagggtattacggtacagagtcaatgtggaggctatatacagggtattacggtacagagtcaatatggaggctatatacagggtattacggtacagagtcaatgtggaggctatatacagggtattacggtacagagtcaatatggaggctatatacagggtattacggtacagagtcaatgtggaggctatatacagggggtactggtacagagtcaatgtggaggctatatacaggggggtaccggtacagagtcgatgtggagactatatacaggggggtaccggta

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU743856 lncRNA downstream 10066 81504832 ~ 81505471 (-) True G654556
TU743847 lncRNA downstream 17600 81497694 ~ 81497937 (-) True G654547
TU743823 lncRNA downstream 46120 81469146 ~ 81469417 (-) True G654523
TU743812 lncRNA downstream 64922 81447435 ~ 81450615 (-) True G654513
TU743782 lncRNA downstream 116184 81398668 ~ 81399353 (-) True G654488
TU744841 lncRNA upstream 44053 81560775 ~ 81561001 (-) True G655308
TU744844 lncRNA upstream 49744 81566466 ~ 81566706 (-) True G655311
TU744846 lncRNA upstream 56296 81573018 ~ 81573372 (-) True G655313
TU744847 lncRNA upstream 58203 81574925 ~ 81575352 (-) True G655314
TU744854 lncRNA upstream 105681 81622403 ~ 81651265 (-) False G655316
XR_005052680.1 mRNA downstream 84937 81423132 ~ 81430600 (-) True LOC118965322
XM_021610731.2 mRNA downstream 162255 81351210 ~ 81353282 (-) False tma7
XM_036984201.1 mRNA downstream 202531 81301536 ~ 81313006 (-) True LOC110528600
XM_021610734.1 mRNA downstream 215794 81298907 ~ 81299743 (-) False LOC110528602
XM_036984185.1 mRNA downstream 792019 80655573 ~ 80723518 (-) False LOC110528585
XM_036984214.1 mRNA upstream 149964 81666686 ~ 81844047 (-) False LOC110528605
XM_036984215.1 mRNA upstream 149964 81666686 ~ 81844047 (-) False LOC110528605
XM_036984213.1 mRNA upstream 149964 81666686 ~ 81898007 (-) False LOC110528605
XM_036984211.1 mRNA upstream 149964 81666686 ~ 81992596 (-) False LOC110528605
XM_036984212.1 mRNA upstream 149964 81666686 ~ 81992596 (-) True LOC110528605
TU743208 other downstream 734846 80778760 ~ 80780691 (-) False G653977
TU743209 other downstream 734846 80778760 ~ 80780691 (-) False G653977
TU743122 other downstream 854509 80650590 ~ 80661028 (-) False LOC110528585
TU742383 other downstream 1167970 80345802 ~ 80347567 (-) True G653274
TU742099 other downstream 1470833 80025960 ~ 80044704 (-) False rab22a
TU744829 other upstream 19835 81536557 ~ 81537098 (-) True G655297
TU744851 other upstream 105681 81622403 ~ 81651265 (-) False G655316
TU744948 other upstream 236833 81753555 ~ 81753966 (-) True G655387
TU745007 other upstream 315956 81832678 ~ 81833031 (-) True G655433
TU745026 other upstream 342649 81859371 ~ 81871057 (-) False G655447

Expression Profile