RNA id: TU745017


Basic Information

Item Value
RNA id TU745017
length 256
lncRNA type intronic
GC content 0.39
exon number 1
gene id G655443
representative True

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 81852091 ~ 81852346 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

GAAACCCCTCAAAGAAGGGCTGTCTCTATGACCTAGTTACAATGACGCCATTTTATTCTGTCTCATAAGAAGAGGGTTCTTTCCATTTCAATGGTGATGGAATATCACTTAGGGTGCAATCTACAACGGTAACATATTGAACCGTTCAGATAATCACTATTTACCCTGTGTCCCTGTTCCAGGTTTTAATAGACACCTTAGTGAAGACATAAGTTATCCAATGAATCATCTTTTAGGTACGTGAAGGAAGGAAAGC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU745011 lncRNA downstream 12538 81839239 ~ 81839553 (-) True G655437
TU745009 lncRNA downstream 15944 81835873 ~ 81836147 (-) True G655435
TU745004 lncRNA downstream 22791 81829089 ~ 81829300 (-) True G655430
TU744989 lncRNA downstream 39199 81811745 ~ 81812892 (-) True G655417
TU744953 lncRNA downstream 43374 81802703 ~ 81808717 (-) False G655392
TU745018 lncRNA upstream 2125 81854471 ~ 81855265 (-) True G655444
TU745030 lncRNA upstream 21107 81873453 ~ 81873674 (-) True G655451
TU745036 lncRNA upstream 29916 81882262 ~ 81882703 (-) True G655457
TU745039 lncRNA upstream 32262 81884608 ~ 81885860 (-) True G655459
TU745040 lncRNA upstream 34160 81886506 ~ 81886722 (-) True G655460
XM_036984214.1 mRNA downstream 8044 81666686 ~ 81844047 (-) False LOC110528605
XM_036984215.1 mRNA downstream 8044 81666686 ~ 81844047 (-) False LOC110528605
XR_005052680.1 mRNA downstream 421491 81423132 ~ 81430600 (-) True LOC118965322
XM_021610731.2 mRNA downstream 498809 81351210 ~ 81353282 (-) False tma7
XM_036984201.1 mRNA downstream 539085 81301536 ~ 81313006 (-) True LOC110528600
XM_021610740.2 mRNA upstream 268992 82121338 ~ 82132214 (-) False sec13
XM_036984220.1 mRNA upstream 268992 82121338 ~ 82132214 (-) True sec13
XM_021610741.2 mRNA upstream 292922 82145268 ~ 82152444 (-) True LOC110528607
XM_036984462.1 mRNA upstream 1007035 82859381 ~ 82860786 (-) True LOC118965368
XM_036984233.1 mRNA upstream 1020363 82872709 ~ 83038968 (-) False LOC110525201
TU745007 other downstream 19060 81832678 ~ 81833031 (-) True G655433
TU744948 other downstream 98125 81753555 ~ 81753966 (-) True G655387
TU744851 other downstream 200826 81622403 ~ 81651265 (-) False G655316
TU744829 other downstream 314993 81536557 ~ 81537098 (-) True G655297
TU744821 other downstream 335369 81515537 ~ 81516722 (-) True G655289
TU745026 other upstream 7025 81859371 ~ 81871057 (-) False G655447
TU745022 other upstream 10062 81862408 ~ 81871517 (-) True G655447
TU745049 other upstream 62362 81914708 ~ 81915510 (-) True G655469
TU745266 other upstream 373606 82225952 ~ 82226545 (-) True G655651
TU745346 other upstream 476052 82328398 ~ 82333298 (-) False G655715

Expression Profile