RNA id: TU745125


Basic Information

Item Value
RNA id TU745125
length 468
lncRNA type inter_gene
GC content 0.32
exon number 2
gene id G655539
representative True

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 82007462 ~ 82007961 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

GTTAGACACAGATAAAGTTAGACAGATAAAGTTAGACAGATAAAGTTAGACACAGATAAAGTTAGACAGATAAAGTTAGACGCAGATAAAGTTAGACAGATAAAGTTAGACAGATAAAGTTAGACACAGATAAAGTTAGACAGATAAAGTTAGACAGATAAAGTTAGACACAGATAAAGGACACAGATAAAGTTAGACAGATAAAGTTAGACACAGATAAAGTTAGACAGATAAAGTTAGACGCAGATAAAGTTAGACAGATAAAGTTAGACAGATACAGTTAGACGCAGATAAAGTTAGACACAGATAAAGTTAGACACGGATAAAGTTAGACACGGATAAAGTTAGACAGATAAAGTTAGACAGATAAAGTTAGACACAGATAAAGTTAGACACAGATAAAGTTAGACAGATAAAGTTAGACACGGATAAAGTTAGACAGATAAAGTTACACAGATAAAGTTACAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU745120 lncRNA downstream 7983 81999159 ~ 81999479 (-) True G655534
TU745109 lncRNA downstream 24581 81982611 ~ 81982881 (-) True G655523
TU745107 lncRNA downstream 25688 81981555 ~ 81981774 (-) True G655521
TU745106 lncRNA downstream 27136 81979879 ~ 81980326 (-) True G655520
TU745104 lncRNA downstream 29297 81977780 ~ 81978165 (-) True G655518
TU745129 lncRNA upstream 3616 82011577 ~ 82011877 (-) True G655542
TU745140 lncRNA upstream 19544 82027505 ~ 82027714 (-) True G655551
TU745151 lncRNA upstream 40005 82047966 ~ 82050318 (-) True G655556
TU745152 lncRNA upstream 42624 82050585 ~ 82051731 (-) True G655557
TU745160 lncRNA upstream 55729 82063690 ~ 82063989 (-) True G655565
XM_036984211.1 mRNA downstream 14866 81666686 ~ 81992596 (-) False LOC110528605
XM_036984212.1 mRNA downstream 14866 81666686 ~ 81992596 (-) True LOC110528605
XM_036984213.1 mRNA downstream 109455 81666686 ~ 81898007 (-) False LOC110528605
XM_036984214.1 mRNA downstream 163415 81666686 ~ 81844047 (-) False LOC110528605
XM_021610740.2 mRNA upstream 113377 82121338 ~ 82132214 (-) False sec13
XM_036984220.1 mRNA upstream 113377 82121338 ~ 82132214 (-) True sec13
XM_021610741.2 mRNA upstream 137307 82145268 ~ 82152444 (-) True LOC110528607
XM_036984462.1 mRNA upstream 851420 82859381 ~ 82860786 (-) True LOC118965368
XM_036984233.1 mRNA upstream 864748 82872709 ~ 83038968 (-) False LOC110525201
TU745049 other downstream 91952 81914708 ~ 81915510 (-) True G655469
TU745022 other downstream 135945 81862408 ~ 81871517 (-) True G655447
TU745026 other downstream 136405 81859371 ~ 81871057 (-) False G655447
TU745007 other downstream 174431 81832678 ~ 81833031 (-) True G655433
TU744948 other downstream 253496 81753555 ~ 81753966 (-) True G655387
TU745266 other upstream 217991 82225952 ~ 82226545 (-) True G655651
TU745346 other upstream 320437 82328398 ~ 82333298 (-) False G655715
TU746032 other upstream 1319518 83327479 ~ 83328180 (-) True G656314
TU746415 other upstream 1600571 83608532 ~ 83615998 (-) True G656671
TU747690 other upstream 1946286 83954247 ~ 83956768 (-) True LOC110528632

Expression Profile