RNA id: TU746068



Basic Information


Item Value
RNA id TU746068
length 202
lncRNA type inter_gene
GC content 0.42
exon number 1
gene id G656350
representative True

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 83363205 ~ 83363406 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


cagacagcagctctatagagatgagatgacttagtgattctgtcagacagcagctctatagagatgagatgatgacttagtgattctgtcagacagcagatctatagagatgagatgacttagtgattctgtcagacagcagctctatagagatgagatgacttagtgattctgtcagacagcagctctatagagatgactt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU746066 lncRNA upstream 211 83362778 ~ 83362994 (+) True G656348
TU746036 lncRNA upstream 31166 83331794 ~ 83332039 (+) True G656318
TU746006 lncRNA upstream 66811 83296143 ~ 83296394 (+) True G656288
TU745973 lncRNA upstream 89988 83268358 ~ 83273217 (+) True G656265
TU745969 lncRNA upstream 98587 83264365 ~ 83264618 (+) True G656262
TU746069 lncRNA downstream 2795 83366201 ~ 83366616 (+) True G656351
TU746070 lncRNA downstream 3671 83367077 ~ 83367284 (+) True G656352
TU746071 lncRNA downstream 4361 83367767 ~ 83367995 (+) True G656353
TU746101 lncRNA downstream 33328 83396734 ~ 83397020 (+) True G656383
TU746158 lncRNA downstream 83572 83446978 ~ 83447210 (+) True G656435
XM_036984464.1 mRNA upstream 52833 83265536 ~ 83310372 (+) True LOC118965370
LOC118965402 mRNA upstream 207486 83155619 ~ 83155719 (+) True LOC118965402
XM_021605164.2 mRNA upstream 580283 82778373 ~ 82782922 (+) True LOC110525199
XM_021605169.2 mRNA upstream 585162 82773777 ~ 82778043 (+) True LOC110525202
XM_036984230.1 mRNA upstream 598440 82354401 ~ 82764765 (+) True dock3
XM_021610760.2 mRNA downstream 190877 83554283 ~ 83616043 (+) False dag1
XM_036984238.1 mRNA downstream 191821 83555227 ~ 83616043 (+) True dag1
XM_021611193.2 mRNA downstream 347955 83711361 ~ 83712203 (+) True LOC110529053
XM_036984240.1 mRNA downstream 396332 83759738 ~ 83782465 (+) False nicn1
XM_036984241.1 mRNA downstream 396332 83759738 ~ 83782465 (+) True nicn1
TU745971 other upstream 90996 83267148 ~ 83272209 (+) True G656264
TU745825 other upstream 206886 83156014 ~ 83156319 (+) True G656125
TU744537 other upstream 903538 82459085 ~ 82459667 (+) True G655042
TU744236 other upstream 1411813 81951002 ~ 81951392 (+) True G654782
TU744059 other upstream 1554478 81767225 ~ 81808727 (+) True G654673
TU746281 other downstream 195431 83558837 ~ 83560518 (+) True G656551
TU747043 other downstream 1140143 84503549 ~ 84520418 (+) True G657228
TU747071 other downstream 1188590 84551996 ~ 84554773 (+) True G657254
TU747111 other downstream 1249423 84612829 ~ 84618717 (+) False G657292
TU747113 other downstream 1251257 84614663 ~ 84618035 (+) False G657292

Expression Profile