RNA id: TU746108



Basic Information


Item Value
RNA id TU746108
length 231
lncRNA type inter_gene
GC content 0.51
exon number 1
gene id G656390
representative True

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 83404961 ~ 83405191 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gatggaggtgatatggtccttgactagtctctcaaagcactttgtgatgacggaagtgagtgctacggggttgtagtcgtttagctcagttaccttatctttcttgggaacaggaacaatggtggctctcttgaagcatgtgggaacagcagactgggataaggattgatcgaatatgtccgtaaacacaccggccagctggtctgcgcatgctctgagggcgcggctggg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU746052 lncRNA downstream 56932 83347795 ~ 83348029 (-) True G656334
TU746007 lncRNA downstream 108058 83296674 ~ 83296903 (-) True G656289
TU745961 lncRNA downstream 147556 83256932 ~ 83257405 (-) True G656254
TU745902 lncRNA downstream 192857 83179513 ~ 83212104 (-) True G656197
TU745891 lncRNA downstream 238183 83163629 ~ 83166778 (-) True G656187
TU746112 lncRNA upstream 1803 83406994 ~ 83407215 (-) True G656394
TU746160 lncRNA upstream 41962 83447153 ~ 83447430 (-) True G656437
TU746207 lncRNA upstream 43837 83449028 ~ 83504292 (-) True G656479
TU746231 lncRNA upstream 88330 83493521 ~ 83493852 (-) True G656502
TU746398 lncRNA upstream 132779 83537970 ~ 83538232 (-) True G656655
XM_036984463.1 mRNA downstream 348529 83056001 ~ 83056432 (-) True LOC118965369
XM_036984232.1 mRNA downstream 365988 82872709 ~ 83038973 (-) False LOC110525201
XM_036984235.1 mRNA downstream 365988 82872709 ~ 83038973 (-) False LOC110525201
XM_036984237.1 mRNA downstream 365989 82876926 ~ 83038972 (-) True LOC110525201
XM_036984231.1 mRNA downstream 365990 82872709 ~ 83038971 (-) False LOC110525201
XR_005052682.1 mRNA upstream 154347 83559538 ~ 83560418 (-) True LOC118965325
XM_036984239.1 mRNA upstream 325994 83731185 ~ 83735497 (-) True LOC110528625
XM_036981845.1 mRNA upstream 483253 83888444 ~ 83905266 (-) False stl3
NM_001124197.1 mRNA upstream 496834 83902025 ~ 83905160 (-) True stl3
XM_036984245.1 mRNA upstream 508680 83913871 ~ 83917078 (-) False LOC110528630
TU746032 other downstream 76781 83327479 ~ 83328180 (-) True G656314
TU745346 other downstream 1071663 82328398 ~ 82333298 (-) False G655715
TU745266 other downstream 1178416 82225952 ~ 82226545 (-) True G655651
TU745049 other downstream 1489451 81914708 ~ 81915510 (-) True G655469
TU745022 other downstream 1533444 81862408 ~ 81871517 (-) True G655447
TU746415 other upstream 203341 83608532 ~ 83615998 (-) True G656671
TU747690 other upstream 549056 83954247 ~ 83956768 (-) True LOC110528632
TU748303 other upstream 1601535 85006726 ~ 85007505 (-) False G658255
TU748304 other upstream 1601535 85006726 ~ 85007505 (-) False G658255
TU748305 other upstream 1601535 85006726 ~ 85007505 (-) True G658255

Expression Profile