Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU749967 |
| length | 928 |
| lncRNA type | inter_gene |
| GC content | 0.37 |
| exon number | 2 |
| gene id | G659452 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 86675467 ~ 86681492 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU749510 | lncRNA | upstream | 86998 | 86588263 ~ 86588469 (+) | True | G659159 |
| TU749508 | lncRNA | upstream | 88313 | 86586611 ~ 86587154 (+) | True | G659157 |
| TU749506 | lncRNA | upstream | 91932 | 86582375 ~ 86583535 (+) | True | G659155 |
| TU749504 | lncRNA | upstream | 94406 | 86580132 ~ 86581061 (+) | True | G659153 |
| TU749503 | lncRNA | upstream | 99574 | 86574799 ~ 86575893 (+) | True | G659152 |
| TU749966 | lncRNA | downstream | 3599 | 86685091 ~ 86686391 (+) | True | G659451 |
| TU750017 | lncRNA | downstream | 81666 | 86763158 ~ 86765882 (+) | True | G659498 |
| TU750177 | lncRNA | downstream | 244601 | 86926093 ~ 86926300 (+) | True | G659623 |
| TU750188 | lncRNA | downstream | 246400 | 86927892 ~ 87007275 (+) | False | LOC110488454 |
| TU750205 | lncRNA | downstream | 263306 | 86944798 ~ 86945295 (+) | False | G659640 |
| XM_036984279.1 | mRNA | upstream | 269438 | 86344725 ~ 86406029 (+) | False | slc6a11b |
| XM_036984278.1 | mRNA | upstream | 269438 | 86345451 ~ 86406029 (+) | True | slc6a11b |
| XM_036984280.1 | mRNA | upstream | 318830 | 86345416 ~ 86356637 (+) | False | slc6a11b |
| XM_036984271.1 | mRNA | upstream | 369933 | 86102266 ~ 86305534 (+) | False | atp2b2 |
| XM_036984285.1 | mRNA | downstream | 304059 | 86985551 ~ 87004405 (+) | False | LOC110488455 |
| XR_002468410.2 | mRNA | downstream | 323424 | 87004916 ~ 87007309 (+) | False | LOC110488454 |
| NM_001160529.1 | mRNA | downstream | 373022 | 87054514 ~ 87056155 (+) | True | si:dkey-42i9.4 |
| XM_036984287.1 | mRNA | downstream | 384670 | 87066162 ~ 87106788 (+) | True | ippk |
| XM_036984290.1 | mRNA | downstream | 435268 | 87116760 ~ 87156905 (+) | False | ecm2 |
| TU749484 | other | upstream | 153645 | 86521060 ~ 86521822 (+) | True | G659136 |
| TU749391 | other | upstream | 262882 | 86408702 ~ 86412585 (+) | False | G659058 |
| TU749087 | other | upstream | 779318 | 85895826 ~ 85896149 (+) | True | G658887 |
| TU749085 | other | upstream | 788346 | 85886592 ~ 85887121 (+) | True | G658885 |
| TU747351 | other | upstream | 1667969 | 85006580 ~ 85007498 (+) | True | G657481 |
| TU750287 | other | downstream | 418972 | 87100464 ~ 87102270 (+) | True | G659706 |
| TU750444 | other | downstream | 703407 | 87384899 ~ 87387283 (+) | True | nisch |
| TU751823 | other | downstream | 1741272 | 88422764 ~ 88427927 (+) | True | G660790 |
| TU751969 | other | downstream | 1940821 | 88622313 ~ 88689342 (+) | True | G660853 |
| TU752005 | other | downstream | 2010402 | 88691894 ~ 88694076 (+) | False | G660886 |
