RNA id: TU765216



Basic Information


Item Value
RNA id TU765216
length 791
lncRNA type read_through
GC content 0.46
exon number 2
gene id kif26aa
representative False

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 9825982 ~ 10013023 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


cttttttttcttacatttttgCCAGAGGTTACTCAGAGGGGGTATATGGCATACCCCCGACTGCATTGCGCGTACCCCCTACCCCAGTTTAGGAATACCTGtacTAACATGGTTCGTGCTGTTCATCTTTAGGGGTCTCAGTAGATCCTCACAGGACAGAGGAGCTGCCAGTCCCACTGAGAGAAGGCTGAGGACAGAGATGACACACAGGACCAACATGTCTGACTCCTTGTCACTAGAGTATATCTCCTGTAGTCTACTTGAAGCCTCGCTATATCTTCCTATGTCTGCCCTGTGGTGCACTAGCTGGATTAAACAACAGTGCCAGGGCAGCAGAAGAGTGCCAGTCTTATACCCATGAGGTTGCCCTCCCCTGGCCTGTGTACTCTGCAAACCATGTCTGTTTATGGGAACAGTTTCTGTTTGCATTGGCTTTCCCACCATTGATAAATAATTACTGGGCAAATAAGGCCTTGATattaggtaggtagcctagcggttaagaactttgggccaataaccgaaaggttgattgtttgaatccccgaactgactaggtgaaaaataggTTTTATGTGGCCTTGCGCAAGGCACTTCtctctaattgctcctgtaagttgctctggataagagcgtctgctgaatgtaaaaaaacgTAAATATTAGAAAGGTAGTCGTACTGAGAGCAGAGCACACAGTGCTTCTGAGAGTGGAGGTGTGTGTTGGGCCACAAGACTTTGACCGCCCCTTTATTTTGCCCAAAACAATGTAAACAAAGTAGAATCGTTCCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU764956 lncRNA downstream 148951 9822426 ~ 9822731 (-) True G671521
TU764949 lncRNA downstream 152450 9819019 ~ 9819232 (-) True G671514
TU764878 lncRNA downstream 209898 9761578 ~ 9761784 (-) True G671449
TU764876 lncRNA downstream 211241 9760238 ~ 9760441 (-) True G671447
TU764867 lncRNA downstream 217110 9754364 ~ 9754572 (-) True G671438
TU765339 lncRNA upstream 55086 10027898 ~ 10028450 (-) True G671823
TU765331 lncRNA upstream 61960 10034772 ~ 10121902 (-) False G671820
TU765371 lncRNA upstream 120040 10092852 ~ 10096091 (-) True G671853
TU765318 lncRNA upstream 142278 10115090 ~ 10121902 (-) False G671820
TU765322 lncRNA upstream 142278 10115090 ~ 10119132 (-) False G671820
XM_036984713.1 mRNA downstream 87564 9825982 ~ 9884118 (-) False kif26aa
XM_036986822.1 mRNA downstream 180613 9774005 ~ 9791069 (-) True LOC118965597
XM_021611467.2 mRNA downstream 321602 9644525 ~ 9650080 (-) True LOC110529336
NM_001160490.1 mRNA downstream 439030 9525869 ~ 9532652 (-) True LOC100301659
XM_036984689.1 mRNA downstream 846447 9012231 ~ 9125235 (-) True cdc42bpb
XM_036984715.1 mRNA upstream 108025 10080837 ~ 10085586 (-) False LOC110529344
XM_021611478.2 mRNA upstream 108025 10080837 ~ 10086403 (-) False LOC110529344
XM_021611477.2 mRNA upstream 108025 10080837 ~ 10086410 (-) True LOC110529344
XM_036984725.1 mRNA upstream 167857 10140669 ~ 10148583 (-) True myh6
XM_021611485.2 mRNA upstream 179983 10152795 ~ 10186202 (-) False LOC110529348
TU764524 other downstream 623803 9346384 ~ 9347879 (-) True G671122
TU764280 other downstream 706589 9263850 ~ 9265093 (-) True G670905
TU764088 other downstream 1009951 8956093 ~ 8961731 (-) True G670733
TU763857 other downstream 1393902 8577051 ~ 8577780 (-) True G670549
TU763341 other downstream 1629562 8340990 ~ 8342120 (-) True G670097
TU765319 other upstream 142278 10115090 ~ 10121973 (-) False G671820
TU765324 other upstream 142278 10115090 ~ 10121902 (-) False G671820
TU765333 other upstream 142278 10115090 ~ 10121973 (-) False G671820
TU766004 other upstream 765412 10738224 ~ 10738686 (-) True G672436
TU766687 other upstream 1371661 11344473 ~ 11344782 (-) True G673053

Expression Profile