RNA id: XM_036984725.1


Basic Information

Item Value
RNA id XM_036984725.1
length 7693
RNA type mRNA
GC content 0.47
exon number 2
gene id myh6
representative True

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 10140669 ~ 10148583 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

tgactgcactgggcctttaattcatcacaaacaaacaaaatatcaaTAATGTGGTTGTTATTACGCAATTACCTTTTACCATGTAATTGTCCAGTAGATCCTGGGTAACTACCAGACTGCCATATACAGTAGAATGTAACTAAATAACCTCTACACATTTTGAGAATCCATATACGACTTATGTGCAGACCTGAATCAGTGAAACACCCCATTAAAAAAGGCCAGAGTGCCTTTGTGTGCTGTGCTATTTGAAGGGCATTGTTGAGTGGAGATGAGCCGAGACAGCTTGTTTTGTGAGAGCTGTGAGAGGTGTCTATGTCATCTCTTAGATAAGGACCGTGGCAAGCAGCCGACCACAGATAAGGAACCAATTCAGCCAAACCCCCATGTCACGACTATTCAGCTGAACACTGCAATATCTACTGTCAGTTATGATCTCTCAAAATTGTCCAATTTTGTGTACTTCTCTTGCATAATACGGTTCAATATACCAAATATGAATGGACACCCAATGCTAAAGAGCTACAGTAAACATAGACAGGGTAGGTCTATTAGGCAGAGCTGtgtggaatgtatttcaaggAGGGTGAAAGCAGGAGATAAGCAGAGACATGTCACTTTCCCTAAAATGGATACTAACAGCTAAAGGTCTTGGAAACTGCCCCCAAGGCACTTCTCAGTCTTGGGATAAAATTGGGTTCTTTTTTTTGTCATGCCACCAGCTACATCCTAATTTGGCCTTCGGTTCCCCTTTATAAAGATCAGACAGCAGAGATGAGCTCGCAGTTACCCACAGAGTCAACAGCAACAAGATCTTTGCTCTGTGTTCACCCCAACTGATTATCTCTTTGTCTGTGGACCTCCAACAGCAACAATGGGTGATGCTCTCATGGCCGAGTTTGGGAAGGCTGCTCACTTTCTGAGGAAGTCAGACAAGGAGCGCCTGGAAGCCCAGACCAGGGCTTTTGACATCAAGACTGAATGCTTTGTGGTTGATGACAAAGTGGAATATGTCAAGGGGCAGATCCAAAGCAAAGAGGGGGGAAAGGTGATCGTAAagagggaggaccagactatcGTGACCGTCAAGGAGGTGGACGTCCATCCCCAGAACCCGCCAAAATACGATAAAATCGAAGACATGGCCATGTTCACCTTCCTCCATGAGCCAGCTGTTCTGTTTAACCTCAAAGAGCGTTACGCAGCCTGGATGATCTACACCTACTCAGGGCTGTTCTGTGTGACAGTGAACCCATACAAGTGGCTTCCTGTCTATGACTCTGAGGTGGTGTCTGCCTACAGGGGGAAGAAGAGGACTGAAGCCCCCCCTCACATCTTCTCCATCTCAGATAACGCCTACCAGTATATGCTTACTGATCGGGAGAACCAGTCTGTTCTTATCACCGGAGAATCCGGTGCTGGAAAGACTGTCAACACCAAGAGAGTCATCCAGTACTTTGCCAGCATTGCAGCAGTTAGTGGTGTTAAGAGGGATCCAAGCAAGGGTACCCTGGAAGATCAAATCATCCAGGCTAACCCTGCACTGGAGGCTTTCGGTAATGCCAAAACACTGAGAAATGACAACTCATCACGTTTCGGCAAATTCATCCGTATTCACTTCGGGACCAGTGGGAAACTGTCCTCTGCCGACGTAGAGACTTACCTTCTTGAGAAGTCCCGTATCACCTTTCAGCTCAAAGCTGAGAGGAACTACCATATTTTCTTCCAGATATTGTCCAATCAAAAACCAGAGCTGTTGGACTTGCTGTTAATCACCAACAATCCATATGACTACTCCTACATCTCCCAAGGAGAAGTAACAGTAGCATCCATCAATGATTCTGAGGAACTGATGGCCACTGATAGTGCCTTCGATGTGCTCGGCTTTACTGCAGAGGAAAAACAGGGGGTCTACAAGTTGACAGGTGCCATAATGCACTACGGCAACATGAGGTTCAAACAAAAGCAGCGGGAGGAGCAGGCAGAGCCTGACGGTACAGAGGCTGCTGACAAGTCAGCTTACCTAATGGGGATAAACTCTGCAGATCTGATTAAAGGACTTTGCCATCCCAGAGTCAAGGTTGGCAATGAGTATGTCACCAAAGGTCAAGGTGTAGATCAGGTCTACTATTCCCTCGGTGCATTGGCTAAGTCAGTGTATGAAAAGATGTTCAACTGGATGGTGGTGAGAATCAACCACTCCCTTGACACAAAACAGGCACGCCAGCATTTCATAGGCGTACTGGACATTGCTGGATTTGAGATCTTTGATTTCAACACCTTTGAACAGCTCTGCATCAACTTCACAAATGAGAGACTGCAACAGTTTTTCAATCATCACATGTTTGTGCTCGAGCAAGAGGAGTACAAAAAGGAGGGCATTGACTGGGAGTTCATCGACTTTGGGATGGACTTGCAAGCTTGCATTGACCTCATTGAAAAGCCACTTGGGATCATGTCAATTCTAGAGGAAGAGTGCATGTTCCCCAAGGCCAGTGACCAGACCTTTAAGGCTAAGCTATATGACAACCATTTGGGCAAGAATAGAATGTTTCAGAAGCCAATTCCAGGTAAGGGCAAGGCAGAGGCACACTTTGCCCTGCTCCACTATGCTGGCACTGTTGATTACAATATTTCTGGCTGGCTGGTGAAGAACAAAGATCCATTGAATGAAACAGTGTGTGGTCTTTATGCAAAATCCTCCCTCAAGCTGTTGAGTCATCTTTTTGCCATCATAGCAACGGAGGGAGGTGACAAAGCTGGTGGAAAAGGAGCCAAAAAGAAAGGGTCTGCTTTCCAGACTGTATCTGCACTTCACAGGGAAAACCTAAACAAGCTGATGAGCACCCTGAAAACCACCCATCCCCACTTTGTCCGCTGCTTGATCCCAAATGAGAGCAAAACGCCAGGGACCATGGACAACTGCCTTGTGATGCACCAGCTTCGCTGTAACGGTGTGCTGGAGGGCATTCGAATCTGCAGAAAGGGCTTCCCAAACAGAGTCCTCTATGGCGACTTCAAACAGAGATATAGAATCCTGAATGCATCCGTCATTCCTGAGGGCCAGTTTATCGACTCCAAGAAAGCCGCTGAAAAGCTGCTGGGATCATTGGACATTGACCACACTCAGTACCGGTTTGGCAACACCAAGGTCTTCTTCAAAGCAGGCTTGCTGGGTACGTTGGAGGAGATGCGAGATGAACAACTCTCCCGCATCATTACAATGATCCAGGCCAACGCAAGAGCCATACTCATGAGGGCAGAGTACCAGAAGCTTGTGGAACGCAGGGATGCTCTAATGGTCATCCAGTGGAACCTTCGCGCCTTTTTAGGGGTTAAGAACTGGCCCTGGATGAAGATGTTCTTCAAAATCAAGCCACTGCTGAAGAGTGCTGAGTCTGACAAGGAGATGGCAAACATAAAGGACGAGTTCACTAAGCTCAAAGAGGCCTTTGAGAAATCAGAAGCAAGACGGAAGGAGCTCGAGGAGAAAGTGGTGAGTATTCTCCAAGAGAAGAATGACCTGCTCCTACAATGCCAGTCTGAGCAGGACACACTAACAGATGCTGAAGAGCGCTGTGAGCAGCTCATAAAAAGTAAGATCCAAATGGAAGCAAAAGTGAAAGAACTGACAGAACGtatggaggatgaagaggagatgaATGCAGATCTCACAGCAAAGAAACGCAAGCTGGAGGATGAATGCTCTGAGTTGAAGAAAGATATAGATGACCTTGAGCTGACATTAGCCAAGGTTGAGAAAGAGAAACATGCCACAGAGAACAAGGTGAAGAACCTCACAGAGGAGATGGCTTCCCAGGATGAAAACATTATGAAGCTGACCAAAGAGAAGAAGGCACTACAGGAGGCTCATCAGCAGACACTCGATGACCTACAGAGTGAGGAGGACAAAGCCAACACCTTGACCAAAGCTAAAGCTAAGCTGGAGCAACAGGTGGATGACCTTGAGGGCTCCCTGGAACACGAAAAGAAAGTCAGAATGGAGCTTGAGCGCTCCAAGAGAAAGCTTGAAGGAGACCTAAAACTGAACCAAGAGAATTTGATGGATTTGGAGAATGACAAACAACAGCTAGATGAGAAACTCAAGAAGAAAGACTTTGAGATGAGCAGCCTGACTGTAAAGATTGAGGATGAGCAGGTGGCTGGAGTTCAGTTCCAGAAGAAACTGAAGGAAAGCCAGGCACGAATTGAAGAGCTTGAAGAGGAGTTGGACGCTGAGCGAGCAGCCCGAGCCAAAGTGGAGAAGCAGCGATCTGATCTCTCCCGCGAACTAGAAGACATAAGTGAGCGTTTGGAGGAAGCAGGAGGGGCCACATCTGCCCAGGTGGAGCTCAACAAGAAGAGAGAGAACGAATTTCTGAAACTTCGTAGGGACCTGGAGGAATCCACGCTTCAACATGAGGCTACTGCTGCATCCTTGAGGAAGAAGCATGCGGACAGTGTGGCCGAACTGGGTGAGCAAATCGACAACCTCCAGCGTGTCAAGCAGAagctagagaaagagaagagTGAGCTGAAGCTGGAGCTAGACGACCTGTCCTCAAATATGGAGAGTGTGGTGAAGGCCAAATCCAACATGGAGAAGATGTGCCGATCAATGGAAGACAATATGAATGAGAACAAGACCAAGTATGAGGAGGCCCAGAGGTCCCTCAATGACTTCTCCTCACAGAGGGCCAGGCTGCTCACTGAAAATGGAGAGTTGGGACGTCAGTTGGAGGAGAAAGAGTGCCTGATTTCACAACTCACCAGGGGCAAGAGCTCCTACACCCAGCAGGTGGAGGATATGCGCAGGCAGCTCGAGGAGGAGGTCAAGGCAAAGAATTCACTGGCCCATGCCGTGCAGTCTTCCCGTCATGACTGTGACCTGCTCAGAGAACAGtttgaggaggagcaggaggccaAGGCAGAGCTGCAGAGGGCACTATCCAAGGCCAACACTGAAGTGTCCACATGGAGGGCAAGGTATGAGACTGATGGAATCCAGAAAACTGAGGAGCTGGAGGAAGCTAAAAAGAAGTTAGTCCAAAGACTGCAAGAAGCAGAGGAGGCTGTGGAGGCTGTGAACGCAAAGTGTTCCTCCCTCGAAAAGACCAAGAGTCGCCTACAAAATGAAATTGAGGACCTGATGTTGGATCTTGAAAGATCTAATGCAGCATCTGCAGCTCTGGACAAGAAGCAGAGAACCTTTGACAAAGTCATGGCTGAGTGGAAGCAGAAGTATGAGGAGTCACAGTGTGAGCTCGAGGGTTCCCAGAAGGAGGCTCGGTCTCTCAGCACTGAGCTCTTCAAATTGAAGAATGCCTATGAGGAGTCCTTGGATCACCTGGAGACCATTCAAAGGGAGAACAAGAACCTGCAGGAGGAGATCTCTGACCTTACTGATCAACTTGGTGAGGGAGGGAAAAGCGCCCATGAATTGGAGAAACTTCGGAAGCAGCTGGAGCAAGAGAAAGCAGAGCTCCAGTCAGCACTTGAGGAGGCAGAAGGTTCCCTGGAGCACGAAGAGGGCAAAATCCTTCGGGCACAGCTGGAGTTCAACCAGGTGAAGGCGGATATTGAGCGCAAGCTGGCCGAGAAAGATGAGGAAATGGAACAGGTCAAGAGGAATTACCAGCGCATGGTAGAGTCACTGCAGACCTCCCTCGAGTCTGAGACCAGGAGCCGCAACGAGGCCCTGAGAGTCAAGAAGAAGATGGAAGGCGACCTCAACGAGATGGAGATCCAGCTTAGCCAAGCCAACAGACAGGCGGCTGATGCCCAAAAGCAGCTTAAGAGCAGCCAGTCATATCTGAAGGATACCCAGCTGCAGCTGGATGACTCTACACACGGGAATGAAGACCTGAAGGAGAACATTGCTCTCTTGGAGCGCAGGAACAATCTGTTCCAAGCGGAGCTGGAGGAACTTCGGGGTGTTCTTGAGCAGACAGAGCGTTGCCGCAAGCTGGCCGAACAGGAGCTCACTGAAGCCACAGAGCGCATGCAGCTCCTGCACTCTCAAAACACAGGCCTTATCAACCAGAAGAAGAAACAAGAGGCTGATCTGCTCCAACTGCAGACCGAGGTGGAGGAAGCTGTACAGGAAAACCGCAATGCTGAAGAGAAGGCCAAGAAGGCCATCACCGATGCAGCCATGATGGCcgaggagctgaagaaggagcaAGACACTAGCGCCCACCTGGAGCGTATGAAGAAGAATATGGAGCAGACCATTAAGGACCTGCAGCACCGTTTGGATGAGGCAGAACAAATCGCAATGAAGGGTGGGAAGAAGCAGCTCCAAAAGCTGGAGTTACGCATCAAGGAGTTGGAGAGCGAGCTGGAGGCGGAGCAGAAGAGGGGCACAGAGTCAATCAAGGGGGTGCGCAAGTACGAGCGGCGCATCAAGGAGCTCACCTACCAGACGACGGAGGATCGCAAGAACATGGCTCGCATCCAGGACCTGGTGGACAAGCTGCAGCTGAAGGTGAAGTCCTACAAGCGCGCCTCCGAGGAGGCAGAGGAACAGGCCAATGCCAACCTGGCCAAGTTCCGCAAGCTGCAGCATGAGCTGGAGGAGGCTGAAGAGCGAGCAGACATAGCCGAGTCCCAGGTGAACAAACTCCGGGCCAAGACCAGGGACGGGTCCGGCAAGAAGGGCTTGGATGAGTGAGGAGGTCCCAAAAGAGCAATGTCACAGGACACCTTCATCGGAGTTCCTGCTGTGTATTTGATCTGCTCTCACCAGCAGTGCGATCCTCCCTCTTCGGCACGAGTGAAGTGAGTTTGGAAAGTATGCATTATAGAAATGATTTTCAGATGCAAACTTTATATGTCTAATCTCGGAATCAAATAGGCTTCCCAAAAAGTATATGATCACTGTGATAAAACGTTTAAGTTGCTAGGGTATTTTCTACATTTTTCAAAGCctcatcaggtagcctgattaacagctgtccATGTTAACCGGATTAGAAGGGAAATCgatcttcttgcaaagcatgtaaatgtTTTAATCAAGCTATTATAGTAATGAGAGTAATCACAATAATCATATTATTGAATGCATGCACCTAATTATTTAATAGGAATAGGCTTCATTGGTTTAAGAATACACACCTAATTCTAATGCCCTAAATAATTTCCCTGTGCAACATAAATCACATTGTATTGTAATTACACAGTTAAAGTGAAATGTGAATACCGTGGTTGGTTATGATGATTACATAAATGTCTTGCTTAGGGCCTGTGCATGTCTTTACTGCATCATACACACATGTTTAAACTATACAGCAGAAAGATGCATTGGTGGATGTGTAAGCGTGGCTTCATGTCTAGTAAGTGGTCATGTTGTTTTTGAGGACAGTCTGTAAACCGTAGCGGGACATGCTGTGTAATATTGTTGATCTAAAGCAGAGAAAAAGGATGGGAAATGTTTTGATGTCAACAAAGATGTTTCCTTAAATTATATATAACTCCCAAAACATGAGTTAATGTCAGCCTTTCATTTGAATCTGTTCCAACAGTGTGTCCATTGTCAATGTAACAATACCAAATTGTCTCCACATTTGTAAAGTACATTGGAAATGAATGCTGCCAACTGTGCACCATAACATCTCAAATCCTTAAAACATCTTAAACTAACAACATTGTATTACAACTAGGaaaataaagcactgctctgcacTAAAAA

Function

GO:

id name namespace
GO:0055004 atrial cardiac myofibril assembly biological_process
GO:0030240 skeletal muscle thin filament assembly biological_process
GO:0071688 striated muscle myosin thick filament assembly biological_process
GO:0003007 heart morphogenesis biological_process
GO:0031444 slow-twitch skeletal muscle fiber contraction biological_process
GO:0060047 heart contraction biological_process
GO:0016459 myosin complex cellular_component
GO:0005524 ATP binding molecular_function
GO:0051015 actin filament binding molecular_function
GO:0003774 motor activity molecular_function

KEGG:

id description
K17751 MYH6_7; myosin heavy chain 6/7

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU765396 lncRNA downstream 3147 10137298 ~ 10137522 (-) True G671874
TU765395 lncRNA downstream 3509 10136710 ~ 10137160 (-) True G671873
TU765394 lncRNA downstream 5374 10134788 ~ 10135295 (-) True G671872
TU765393 lncRNA downstream 6885 10133374 ~ 10133784 (-) True G671871
TU765392 lncRNA downstream 7518 10132431 ~ 10133151 (-) True G671870
TU765402 lncRNA upstream 2674 10151257 ~ 10151979 (-) True G671879
TU765450 lncRNA upstream 97597 10246180 ~ 10246388 (-) True G671925
TU765452 lncRNA upstream 106120 10254703 ~ 10254927 (-) True G671927
TU765463 lncRNA upstream 118016 10266599 ~ 10267809 (-) True G671938
TU765667 lncRNA upstream 141678 10290261 ~ 10290472 (-) True G672120
XM_021611477.2 mRNA downstream 54259 10080837 ~ 10086410 (-) True LOC110529344
XM_021611478.2 mRNA downstream 54266 10080837 ~ 10086403 (-) False LOC110529344
XM_036984715.1 mRNA downstream 55083 10080837 ~ 10085586 (-) False LOC110529344
XM_036984711.1 mRNA downstream 147217 9825982 ~ 9993452 (-) False kif26aa
XM_036984712.1 mRNA downstream 147217 9825982 ~ 9993452 (-) False kif26aa
XM_021611485.2 mRNA upstream 4212 10152795 ~ 10186202 (-) False LOC110529348
XM_021611484.2 mRNA upstream 4212 10152795 ~ 10191112 (-) True LOC110529348
XM_036984727.1 mRNA upstream 46267 10194850 ~ 10212507 (-) False LOC110529349
XM_036984726.1 mRNA upstream 46267 10194850 ~ 10212544 (-) False LOC110529349
XM_036984728.1 mRNA upstream 46267 10194850 ~ 10212544 (-) True LOC110529349
TU765319 other downstream 18696 10115090 ~ 10121973 (-) False G671820
TU765333 other downstream 18696 10115090 ~ 10121973 (-) False G671820
TU765324 other downstream 18767 10115090 ~ 10121902 (-) False G671820
TU765218 other downstream 167857 9971682 ~ 9972812 (-) False kif26aa
TU765219 other downstream 167857 9971682 ~ 9972812 (-) False kif26aa
TU766004 other upstream 589641 10738224 ~ 10738686 (-) True G672436
TU766687 other upstream 1195890 11344473 ~ 11344782 (-) True G673053
TU767508 other upstream 1836251 11984834 ~ 11990363 (-) False LOC110529377
TU767500 other upstream 1836892 11985475 ~ 11994689 (-) False LOC110529377
TU767509 other upstream 1836892 11985475 ~ 11997491 (-) False LOC110529377

Expression Profile