RNA id: XM_021611574.2


Basic Information

Item Value
RNA id XM_021611574.2
length 4554
RNA type mRNA
GC content 0.46
exon number 25
gene id enpp1
representative True

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 12951277 ~ 12999904 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

TACCACCTTCAACCTGAAGTTTAGCTGTCTTTATACATGTCCGAGGTAGTCTATTGTAATAATTACAGTGAGTAGTTATTGTACATAAAGCGAATGTTGGCTAATTACAAATATCCTCTCAACATAATTACAAACGTCCAACTCTAGCTCTCCATACCTATTGTGGCGTCTATTTTCGATGTTTCCTCTGCCATTCGTGAGGGTGGTGTGGCAGTACTTGGTCGCGGTAGTCTTGTAATTGACTTTTTAATGGTACTACTCCAATACTGTACTTCACCCTGACTCAGCTGGCTGCACATATTGTATAAGGATTAGGCTACAACGCTAACTTCGAGACGTCAACACTAAAAGAAGGCGGTTCTTCATTGAGCCCTACAAAATCCAAAGGCAAAAGAGACCAGACTATTTTCTCTCAAGTCTGCAAAAACTTTCTGTAACAAACCCCCGGGAAAAACGTTCTCCAGAATGGAAATATCCAAAGCAGATGACCTTTCGTCTGAGCAGGCTGCCAATTTACTAGGTTCACCTGGTCGAGACAATCAGATGAGACAGAGTGGACAGGTCCATAAAAAGAGGTCGAAGAACCGCATGGTCATCGTTGCGGTACTGTTGCTCTGCTTGCTGATGATCACTGTCATCGTGGTCGTATTTGCCTTGAAGCAGCGCTGCGATGTTAAAGTGTCAAGCTGTAAAAACAGGTGTGTGACGGGCAGCAGGGACAAGTCTGCATCGTGCCACTGTGACCTGTCCTGTGAGAAAGAGGGAAACTGCTGTCTGGATTACACTGAGGTGTGCGTGGAGCCTGgtcaGCGTTGGACCTGTTCCAGATTCCGCTGTGGTGAGGAGAGGTTGGCCAATGGCCTGTGCTCCTGCTCTGATGACTGTGTGAAAGCAGGGGACTGCTGTGCAAATTACTACAGCTCCTGCAAAGTGGGAGTGAAGTCTTGGATAGAAGAGGAGTGTGAGGACATTCAAACACCACAATGTCCTGCCAGTTTTTCCAAACCCCCACTGATCCTGGTGTCTATGGATGGCTTCCGGGCAGGTTATTTAAAGGCCTATGGCAGTCTTCTTCCAGTCATCAGCAAATTACGCAACTGTGGCACTTCTACCTCATACATGAGACCTGTCTACCCCACCAAGACCTTCCCCAACCACTACACCATTGTGACTGGCCTCTATCCAGAGTCCCATGGGATCGTTGACAACAAGATGTATGATGTGACCCGCAACGCCTCCTTCAGTTTGAAGGTTCCCGAAAAATTCAATGCCAAATGGTACCAAGGAGAACCAgtttgGTTCACTGCCATGGACAATAACCTGAAATCAGCCACATTCTTCTGGCCGGGCTCTGATGTGGCAGTCAATGGAAGATTACCTGACTTCTATAAGAAGTATGACAAGAGCATCTCATTTGAGGAGAGAATCTCAACCATATTTCAATGGCTGAACTTACCTCAAGGGGAAAGGCCAGATTTTTACACTCTGTACATGGAGGAACCAGACTCTGCCGGCCACCGATACGGACCAATGAGCAGCCAGGTGATTGAGGCCCTGCTGAACGTGGACAGGTTGTTAGGACTTCTAATGGACGGCTTGAAACAGAAGAACCTTCACCGCTGTGtcaatctggtgcttctgtctgACCACGGAATGGAGGAAGCTTCCTGCAAAAAGGCTGCATTTGTAAGCTCGTACCAGGACAACATTGACGACTTCACTGTCATCCAAGGCCCTGCTGCGCGAATCCGACCCAAGAACCTCCCAGAAGACTTCTTCTCCTTCGACTATGAAGGCCTGGTGAAGAATCTGTCGTGCAGGAGCCCTGACCAGCCCATGAGGCCCTACCTCAAAGAGCACCTTCCCAAACGGATGCACTTTGCTAACAACGTGCGCATTGAGAAGGCCCATCTCTACATGAAGCCTGGCTGGCAAGCAGCTCTACAACCTAAGGAAGTCAAGTACTGCACTGGTGGATTCCACGGCTCGGATAACGTCTTCAAAAACATGCAGgCCATTTTTATCAGTTATGGACCAGGGCTGAAATACAAGACCCAAGTTGCACCTTTTGAAAACATTGAAGTGTACAACCTCCTGTGTGATTTGTTGGACGTTCCCCCTGCTCCTAACAACGGGACCCATGGGAGTCTGAACCACCTCCTGAAGAACCCTCCCCACCGCCCCGTGTACCCAGCTGAGCTCTCCTCTAACTCCACCTGTGAGGCCAGTGGCCTTGCCCCCTCTGACCACCTGGGCTGTAGCTGCAGCACCCGCACCAAAGCAGCGGAGAAGACTATGAACAGGCAACTCATCAAAGACAATTCCAttTCCGGAACCAAGGCTCTTCACCTACCATATGGAATCCCTCGAGTTCTCCAGGAGAATTCTGAGTACTGTGTCCTGCACCACGCCGACTACATCAACGGTTACAGCAAAGATACTCTCATGCCCTTATGGGTCGCCTACACAATTAACCCACTGAACAATGTCCAGCCACTGAGTCCAGTAGCGGAGGCCTGTGTCCGTGCAGACGTCCGTGTGGCGCCGCTCTTCAGCCAGAACTGTGTCAGATACAAGGACAACCCTGCGCTGTCCTACGGCCTGCTGCATCCACCCAATCTGGGTGCCAATGGAACAGAGGCAGAGTCACTACTCACCAGCAACATTGCGCCCATGTACCCTGCTTTTAAAGCTGTTTGGACGTACTTCCATGACGTCCTCCTGGTGAAATATTCCCAGCAGCTGAATGGGGTCAACGTTATGAGTGGACCTATCTTTGACCGGCACTACGACGGACACTTTGACACTCCTACAGTTAGCACACCACAACATGAGGCTCCCATCCCCACTCACTTCTATGTGATCCTGACCAGCTGTGGAAACTCTTCCTTCTCCCCTGCTGACTGCCAGGGTCCCCTGGAGACCACCTCCTTCACCCTCCCCCATAGACCAGACCACACTGAGACCTGTGCTaATGGCTCAGACTTCCAATGGGTCCAGGAGTGGGCCCAGTTCCATGCTTCCCGGGTCCGAGACATAGAGCTCCTGACTGGACTCAGCTTCTACCACAACAGGATATCAGTGGAGGAAACGCTACAGCTCAAGACATTTTTACAGACTTTCTAAGATCCCAAGAAGTTGCCTCCGGCAGGTTTTAGTACCATATTTTGTTATCGCTGTAAGGCCTTACTACACATATGCAAGTAAAAAGGCACGGGCTAAATGTGTAGCCTTGGATCCCATTAAATTAAAAAAGGTGTAACACTTATATTTAAGTGCATAAAGAGGGAAAAAAAGCTGTACTGTTTAAGTGAGAAATTGCTTGAACCTCAATCATAGACTTTAAACCAGAAAGGCATACACTGAAAGAAGCCAAGTTATGACACATAATATAATAGACCGTTGTCTGTTTGGACTTGAGCCAGAACACTGAACCAAAGAAGTCATCATTACAGTGCATTTcgagagtattcagacccattttcTTGTtacaatatgacatttacataagtattcagaccctttgttatgagacttgaatttgagctcaggtgcatcctgtttctacaacttggagtctacctgttgtaaattcaattgattggacatgatttggaaaggcacacacctgtctatataagctcccacttgaacccaattgaacatctctggagagacctgataataACTATGCAGTGACgttccacatccaacctgacagagtttgagaggatctgcagagaagaatgggagaaactccccaaatacagatgtgcaaagcttgtagtgtcatactcaagaagacttgaCAGTAaacgttgccaaaggtgcttcaccaaagtactgagtaaagggtctgaatacttatgtaactgtgatttcagtttttttttttacatttgcaaaaatgtctaaaaacctgttattactttgtcattatggggtattgtgtgtagattgagggatttaaacaaatctattttagaataagtctgtaacgtaacaaaatggacaagtcaaggggtctaaatactttccgaatgcactgtagatccaTCTACCACTCTGCTGAACACCCCTCTTTCATCCCAGAAAAACAAGGGGAAAGAGTGAGAATGGAAGAAAATACGAGGAAACCGGCATATAAATAGGAATTCTATTTGACTAAGTGATTATAATAGCTGGGACATTCTCAGGAAACCTCAGACATTCTGGAATGCAAAAGTTAGTAACGGACACTGGCCGAAGGCCTGAAACACTGCCAAAGTGTTTGACTCAGATGTCTGTGATTCGGAGAGTTGGCTGAAAGACATGGCATGGGTGCTCAACAGAAAGTGTTTAGTCTACAAGAACAAAAACAGGAAAACCACACATTCCACACACATGTTCATGGTTGCACTTGCCAAATGGTGTCATTGTATGTTTGACTAGATAgtgtttttattttgttaatATCAATGTTTTTATATATTGAGTATATTTTTATTGCTCTGTCACTATAAATTAAAGGTTGTGAAGTTGATGTGGGGAATTGGGATTAAATTCTTGACAGGA

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0006955 immune response biological_process
GO:0046872 metal ion binding molecular_function
GO:0016787 hydrolase activity molecular_function
GO:0003676 nucleic acid binding molecular_function
GO:0030247 polysaccharide binding molecular_function
GO:0005044 scavenger receptor activity molecular_function

KEGG:

id description
K01513 ENPP1_3, CD203; ectonucleotide pyrophosphatase/phosphodiesterase family member 1/3

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU768676 lncRNA downstream 22724 12927877 ~ 12928553 (-) True G674842
TU768737 lncRNA downstream 47784 12902491 ~ 12903493 (-) True G674897
TU768736 lncRNA downstream 48062 12902491 ~ 12903215 (-) False G674897
TU768715 lncRNA downstream 79542 12870556 ~ 12871735 (-) True G674877
TU768576 lncRNA downstream 158728 12792137 ~ 12792549 (-) True G674747
TU768839 lncRNA upstream 119424 13119328 ~ 13120250 (-) True G674995
TU768881 lncRNA upstream 182697 13182601 ~ 13182928 (-) True G675036
TU768889 lncRNA upstream 189076 13188980 ~ 13189359 (-) True G675044
TU768891 lncRNA upstream 190874 13190778 ~ 13191002 (-) True G675046
TU768901 lncRNA upstream 199732 13199636 ~ 13199905 (-) True G675053
XM_036986824.1 mRNA downstream 8142 12929263 ~ 12943135 (-) True sytl3
XM_036986823.1 mRNA downstream 243878 12697506 ~ 12707399 (-) False ints7
XM_036984801.1 mRNA downstream 253954 12615879 ~ 12697323 (-) False lpgat1
XM_021611564.2 mRNA downstream 340462 12604696 ~ 12610815 (-) True nek2
NM_001124528.1 mRNA downstream 349259 12592682 ~ 12602018 (-) True slc30a1a
XR_005052779.1 mRNA upstream 159561 13159465 ~ 13164697 (-) True LOC110529421
XM_021611580.2 mRNA upstream 320551 13320455 ~ 13331256 (-) False LOC110529423
XM_036984806.1 mRNA upstream 320551 13320455 ~ 13331260 (-) True LOC110529423
XM_021611587.2 mRNA upstream 375638 13375542 ~ 13384455 (-) False LOC110529426
XM_021611598.2 mRNA upstream 498114 13498018 ~ 13509334 (-) False tmem151ba
TU768544 other downstream 253954 12615880 ~ 12697323 (-) True lpgat1
TU767753 other downstream 667057 12283837 ~ 12284220 (-) True G674015
TU767588 other downstream 809283 12140370 ~ 12141994 (-) True G673867
TU767583 other downstream 925535 12018616 ~ 12025742 (-) True G673863
TU767510 other downstream 960833 11985475 ~ 11990444 (-) True LOC110529377
TU769232 other upstream 375035 13374939 ~ 13398443 (-) False LOC110529426
TU769234 other upstream 375035 13374939 ~ 13378281 (-) True LOC110529426
TU769335 other upstream 484189 13484093 ~ 13484934 (-) True G675413
TU769337 other upstream 485775 13485679 ~ 13486137 (-) True G675415
TU769793 other upstream 983722 13983626 ~ 13986108 (-) False G675834

Expression Profile