RNA id: XR_005053049.1



Basic Information


Item Value
RNA id XR_005053049.1
length 72
RNA type mRNA
GC content 0.42
exon number 1
gene id LOC118965671
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 16287319 ~ 16287390 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


TATTAAGGATGAACCTATCCCGAACCTGATTCCTGTAAGATTGACAACCCTGTCGGATCTGACTTCTGAAAT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU773412 lncRNA downstream 3401 16283712 ~ 16283918 (-) True G679003
TU773366 lncRNA downstream 31887 16248881 ~ 16255432 (-) True G678962
TU772646 lncRNA downstream 126810 16160207 ~ 16160509 (-) True G678317
TU772644 lncRNA downstream 128918 16158170 ~ 16158401 (-) True G678315
TU772642 lncRNA downstream 129487 16157607 ~ 16157832 (-) True G678313
TU773417 lncRNA upstream 11000 16298390 ~ 16299479 (-) True G679008
TU773438 lncRNA upstream 95484 16382874 ~ 16383170 (-) True G679027
TU773439 lncRNA upstream 96498 16383888 ~ 16384343 (-) True gjb7
TU773500 lncRNA upstream 120226 16407616 ~ 16407830 (-) True G679076
TU773502 lncRNA upstream 120907 16408297 ~ 16408580 (-) True G679078
XR_005053048.1 mRNA downstream 182 16287066 ~ 16287137 (-) True LOC118965670
XR_005053047.1 mRNA downstream 429 16286819 ~ 16286890 (-) True LOC118965669
XR_005053046.1 mRNA downstream 682 16286566 ~ 16286637 (-) True LOC118965668
XR_005053042.1 mRNA downstream 927 16286321 ~ 16286392 (-) True LOC118965664
XR_005053053.1 mRNA downstream 1171 16286077 ~ 16286148 (-) True LOC118965675
XR_005053050.1 mRNA upstream 182 16287572 ~ 16287643 (-) True LOC118965672
XR_005053054.1 mRNA upstream 430 16287820 ~ 16287891 (-) True LOC118965676
XR_005053043.1 mRNA upstream 677 16288067 ~ 16288138 (-) True LOC118965665
XR_005053051.1 mRNA upstream 924 16288314 ~ 16288385 (-) True LOC118965673
XR_005053052.1 mRNA upstream 1171 16288561 ~ 16288632 (-) True LOC118965674
TU770677 other downstream 1770791 14511590 ~ 14516528 (-) True G676635
TU770156 other downstream 1998974 14287849 ~ 14288345 (-) True G676178
TU770045 other downstream 2079694 14206987 ~ 14207625 (-) True G676077
TU769793 other downstream 2301211 13983626 ~ 13986108 (-) False G675834
TU773511 other upstream 145231 16432621 ~ 16433014 (-) True G679087
TU773640 other upstream 337700 16625090 ~ 16630259 (-) False G679210
TU773642 other upstream 337700 16625090 ~ 16630259 (-) True G679210
TU773944 other upstream 826153 17113543 ~ 17114528 (-) True G679471
TU776244 other upstream 2503840 18791230 ~ 18792137 (-) True G681659