Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU775624 |
| length | 206 |
| lncRNA type | sense_over |
| GC content | 0.39 |
| exon number | 1 |
| gene id | LOC110529194 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 18331547 ~ 18342108 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0007017 | microtubule-based process | biological_process |
| GO:0016043 | cellular component organization | biological_process |
| GO:0044430 | obsolete cytoskeletal part | cellular_component |
| GO:0015630 | microtubule cytoskeleton | cellular_component |
| GO:0000166 | nucleotide binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU775485 | lncRNA | upstream | 14489 | 18319047 ~ 18319349 (+) | True | G680957 |
| TU775484 | lncRNA | upstream | 14895 | 18318163 ~ 18318943 (+) | True | G680956 |
| TU775487 | lncRNA | upstream | 23886 | 18309150 ~ 18309952 (+) | True | G680959 |
| TU775445 | lncRNA | upstream | 134019 | 18199531 ~ 18199819 (+) | True | G680920 |
| TU775444 | lncRNA | upstream | 134866 | 18198381 ~ 18198972 (+) | True | G680919 |
| TU775629 | lncRNA | downstream | 4402 | 18338445 ~ 18347351 (+) | True | G681084 |
| TU775704 | lncRNA | downstream | 123718 | 18457761 ~ 18461807 (+) | False | G681151 |
| TU775705 | lncRNA | downstream | 123718 | 18457761 ~ 18464343 (+) | True | G681151 |
| TU775721 | lncRNA | downstream | 139726 | 18473769 ~ 18473996 (+) | True | G681167 |
| TU775725 | lncRNA | downstream | 143243 | 18477286 ~ 18478291 (+) | True | G681171 |
| XM_036986828.1 | mRNA | upstream | 16238 | 18310907 ~ 18317600 (+) | True | LOC118965599 |
| XR_002474400.2 | mRNA | upstream | 22774 | 18274367 ~ 18311064 (+) | False | LOC110529521 |
| XM_021611766.2 | mRNA | upstream | 25231 | 18274367 ~ 18308607 (+) | False | LOC110529521 |
| XM_036984915.1 | mRNA | upstream | 25231 | 18283223 ~ 18308607 (+) | True | LOC110529521 |
| XR_005053017.1 | mRNA | upstream | 168982 | 18162705 ~ 18164856 (+) | True | LOC110531073 |
| XR_005052821.1 | mRNA | downstream | 28745 | 18362788 ~ 18389361 (+) | False | LOC110529523 |
| XR_005052822.1 | mRNA | downstream | 28745 | 18362788 ~ 18389361 (+) | False | LOC110529523 |
| XM_021611768.2 | mRNA | downstream | 41750 | 18375793 ~ 18449484 (+) | False | LOC110529523 |
| XM_036984916.1 | mRNA | downstream | 41751 | 18375794 ~ 18449484 (+) | False | LOC110529523 |
| XM_036984918.1 | mRNA | downstream | 41751 | 18375794 ~ 18449484 (+) | True | LOC110529523 |
| TU773135 | other | upstream | 1439003 | 16893159 ~ 16894835 (+) | True | LOC110529505 |
| TU772807 | other | upstream | 1945502 | 16387450 ~ 16388336 (+) | True | LOC110529493 |
| TU772802 | other | upstream | 1945602 | 16387450 ~ 16388236 (+) | False | LOC110529493 |
| TU772798 | other | upstream | 1945761 | 16387450 ~ 16388077 (+) | False | LOC110529493 |
| TU772775 | other | upstream | 1947893 | 16384802 ~ 16385945 (+) | True | G678417 |
| TU776513 | other | downstream | 829893 | 19163936 ~ 19165640 (+) | True | G681909 |
| TU777286 | other | downstream | 1394790 | 19728833 ~ 19729671 (+) | True | G682611 |
| TU778522 | other | downstream | 2228832 | 20562875 ~ 20563434 (+) | True | G683669 |
| TU778611 | other | downstream | 2292907 | 20626950 ~ 20632899 (+) | True | G683757 |
| TU778731 | other | downstream | 2373015 | 20707058 ~ 20707371 (+) | True | G683845 |
