Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU776322 |
| length | 1555 |
| lncRNA type | read_through |
| GC content | 0.39 |
| exon number | 2 |
| gene id | LOC110529535 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 18904660 ~ 18913467 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0051013 | microtubule severing | biological_process |
| GO:0006200 | obsolete ATP catabolic process | biological_process |
| GO:0005813 | centrosome | cellular_component |
| GO:0000922 | spindle pole | cellular_component |
| GO:0030496 | midbody | cellular_component |
| GO:0005874 | microtubule | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0005524 | ATP binding | molecular_function |
| GO:0008568 | microtubule-severing ATPase activity | molecular_function |
| GO:0008017 | microtubule binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU776329 | lncRNA | downstream | 112 | 18903581 ~ 18904548 (-) | True | G681735 |
| TU776338 | lncRNA | downstream | 15684 | 18888695 ~ 18888976 (-) | True | G681744 |
| TU776331 | lncRNA | downstream | 28164 | 18874069 ~ 18876496 (-) | True | G681737 |
| TU776293 | lncRNA | downstream | 66299 | 18836446 ~ 18838361 (-) | True | G681704 |
| TU776261 | lncRNA | downstream | 98997 | 18805460 ~ 18805663 (-) | True | G681676 |
| TU776327 | lncRNA | upstream | 28348 | 18934732 ~ 18936071 (-) | True | LOC110529537 |
| TU776375 | lncRNA | upstream | 101187 | 19007571 ~ 19007783 (-) | True | G681777 |
| TU776378 | lncRNA | upstream | 102310 | 19008694 ~ 19008957 (-) | True | G681780 |
| TU776394 | lncRNA | upstream | 115028 | 19021412 ~ 19021922 (-) | True | G681796 |
| TU776418 | lncRNA | upstream | 130486 | 19036870 ~ 19039566 (-) | True | G681819 |
| LOC110529199 | mRNA | downstream | 9470 | 18889096 ~ 18895190 (-) | True | LOC110529199 |
| XM_036984924.1 | mRNA | downstream | 21098 | 18876734 ~ 18883562 (-) | True | LOC110529532 |
| XM_021611785.2 | mRNA | downstream | 21446 | 18876734 ~ 18883214 (-) | False | LOC110529532 |
| XM_021611778.2 | mRNA | downstream | 189840 | 18690451 ~ 18714820 (-) | True | LOC110529528 |
| XM_021611777.2 | mRNA | downstream | 216995 | 18676608 ~ 18687665 (-) | True | LOC110529527 |
| XM_021611787.2 | mRNA | upstream | 7326 | 18913710 ~ 18921786 (-) | False | LOC110529533 |
| XM_021611786.2 | mRNA | upstream | 7326 | 18913710 ~ 18922071 (-) | False | LOC110529533 |
| XR_002474403.2 | mRNA | upstream | 10357 | 18916741 ~ 18922072 (-) | True | LOC110529533 |
| XM_021611793.2 | mRNA | upstream | 15849 | 18922233 ~ 18924820 (-) | True | LOC110529538 |
| XM_021611790.2 | mRNA | upstream | 29172 | 18935556 ~ 18947785 (-) | False | LOC110529537 |
| TU776244 | other | downstream | 112523 | 18791230 ~ 18792137 (-) | True | G681659 |
| TU773944 | other | downstream | 1790132 | 17113543 ~ 17114528 (-) | True | G679471 |
| TU773640 | other | downstream | 2274401 | 16625090 ~ 16630259 (-) | False | G679210 |
| TU773642 | other | downstream | 2274401 | 16625090 ~ 16630259 (-) | True | G679210 |
| TU773511 | other | downstream | 2471646 | 16432621 ~ 16433014 (-) | True | G679087 |
| TU779858 | other | upstream | 2572382 | 21478766 ~ 21479203 (-) | True | G684844 |
| TU780899 | other | upstream | 3014043 | 21920427 ~ 21924908 (-) | False | LOC110529207 |
| TU780900 | other | upstream | 3014043 | 21920427 ~ 21924908 (-) | True | LOC110529207 |
| TU781111 | other | upstream | 3252646 | 22159030 ~ 22161042 (-) | False | G685953 |
| TU783285 | other | upstream | 4710523 | 23616907 ~ 23621246 (-) | True | LOC110529643 |
