RNA id: XM_021611995.2


Basic Information

Item Value
RNA id XM_021611995.2
length 2039
RNA type mRNA
GC content 0.46
exon number 6
gene id adat2
representative False

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 23146458 ~ 23151249 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

TATCTTCCCCTTCAATGTGCGCAAATTTGTTCCAGGCAGACGGTGGGGATTTTATAACTGTCGCATGAGCTCTCTGTAATTGGAGTAGCTAGTTGGTGTGCGTTTGTGTAATCTAATTTATCTAGTTTCTCAGACTGTACATTCAACATGGGGACAGAGCATGTGGGGAATGATGTCGTTTCTAAAGAGAACTTCCAGCCATGTGCCGAAGACATACAGAGGTGGATGGCTAATGCCTTTGACATGGCAAAAGAAGCCTTGGAGAATGGTGAGGTGCCTgttggatgtctcatggtctacAACAATGAGATTCTTGGAAAAGGGAGAAATGAAGTGAATGAAACAAAAAATgCCACTCGCCATGCTGAGATGGTGGCTCTGGACCAGGTGCTGGAGTGGTGTCGTCATAGAGACCTGGACCCCAGGACAGTGTGTGAGAGGACTGTGCTCTACGTGACTGTGGAGCCTTGCATCATGTGTGCAGGAGCTCTTCGCCTGACCAACATTCCTCTAGTGGTCTATGGGTGTAATAATGACAGGTTTGGTGGCTGTGGATCTGTTCTAGACATTCCCTCGGCTGATCTACCTCACACTGGCTCATCATTTAAGTGTATCTCTGGCTTCAGAGCAGAGGAAGCAGTGGAGATGCTGAAGACTTTTTATAAACAGGAGAACCCTAATGCTCCCAAGCCGAAGACGAGGAAAGAGTGATATTTTGTTGGTGTCCAGCAGGGGGCTCTAGACTTTAAGAAATGAGGTGAGGAGCAGAGAAGGATGATGTAAATGGAGTAGCTAACAAAGCTTTTTCCCTAAACAGACTTGGATTTGTCTTTCTGACAAAGGAatcaaatagattttttttgtgttCTCACTTATTTGCTCAGACGTTTGTGTTAGCACTCATTTTCATTTTCATATTATTGACAGTATATTAGACCCTTACAGTATAGTTTGGCTGGACACAAACGTCTGGAAAGTGGCTTGATTGTGATGCTTTGCAGGCTCTGTATCTTTCCTGTGTGGTTGGCTATGTGAGGAGCTGCTGCTGACTTTATTATGGTTATTAGTGTACTGTACCAAGTAGACAGAAACTGTCCGGTCTGCATTATTGTCTGGGTTCTCTTCTTCTCCATGTTCTCATCTAACCCAGAATGTGATCTCACTCCGAGCACCCTGGGTCTAGGATGAGCTGAGCTTAAGGCAGGTACCGGGGGCCCCTCAGCAACCTCTaaaggagctctctctctctctggcgtcAGTCATCAACTGCCGTCATGGATCTGAAATCAGTGTTGCCCCCCGAGGCCATTTCCCACTCCAATGTATCATGTCTGTGATAGTTTCTGGGTTTGTTATGCATGTCTTGGATTGTTAAGTACTGGCGTCGTCATGTACAATAGGATGGTGGGGTTCTCTACTTTGAAAATGTTGTGATTACTAAGTGGCATAGCTGctttgtgatttatttattttctgctgAAGAACAAATACATATTCACAGCATTAGTCTCAGCGGGAGAAGGAACACTGAATAGTATAATAGACTGGGAGCGCCCATGCAGACAGTCCTGTCTCTCCTACTGAATGACTAGGCCAGACTTCACTGCAGAGGGACCATATTTCAATGTGGGACCAACTTATTTCAGATCAGAAAGGAGACAAATGTCCGTTCCATCGTCTCCCGCAGGTATTTTGATCTCAGTCTCAGTAACCACCAACACTCACACCAGCACTGCAGTTTGGTGTGTGACAAACGGAATGTGTTTGTAGCGTAGAGCACAGCTGTGAGGGGTAATAGTCAGTCTGAAGCGCCTCCCCTTCACATAGCAGCAGGCCGGCAGCATCCCTCAGCCTTAAACCCTTAGTGGTCTCTTCCCTGGACAGGATCAGGAACAGAGGAAGTAACCGCCCAGTCAGCATCAGACAGTTCCGGTTGTACCAGCTCCAAGTGACTGCtccacactgacctgctgtagcTTTCACTATTGTTTAAAACTCTCTCTTGTAAATCTAATAAAACTTTTTTGAAATGCACAAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU782295 lncRNA downstream 2033 23142386 ~ 23144425 (-) True G687007
TU782236 lncRNA downstream 116952 23028240 ~ 23029506 (-) True G686951
TU782226 lncRNA downstream 135891 23005517 ~ 23010567 (-) True G686943
TU782194 lncRNA downstream 205975 22940030 ~ 22940483 (-) True G686913
TU782193 lncRNA downstream 206697 22939470 ~ 22939761 (-) True G686912
TU782311 lncRNA upstream 5640 23156889 ~ 23157099 (-) True G687016
TU782312 lncRNA upstream 5949 23157198 ~ 23157609 (-) True G687017
TU782332 lncRNA upstream 13521 23164770 ~ 23165125 (-) True G687031
TU782335 lncRNA upstream 22722 23173971 ~ 23174316 (-) True G687034
TU782342 lncRNA upstream 34909 23186158 ~ 23186391 (-) True G687041
XM_021611989.2 mRNA downstream 79506 22970089 ~ 23066952 (-) True hivep2a
XM_021611988.2 mRNA downstream 79546 22970089 ~ 23066912 (-) False hivep2a
XM_021611990.2 mRNA downstream 86075 22970089 ~ 23060383 (-) False hivep2a
XM_021611991.2 mRNA downstream 122019 22970089 ~ 23024439 (-) False hivep2a
XM_021611987.2 mRNA downstream 196387 22929691 ~ 22950071 (-) False si:ch211-202p1.5
XM_021614354.2 mRNA upstream 41315 23192564 ~ 23198250 (-) True batf3
XM_021612008.2 mRNA upstream 48262 23199511 ~ 23202223 (-) False nsl1
XM_021612009.2 mRNA upstream 48681 23199930 ~ 23202233 (-) True nsl1
XM_021612016.2 mRNA upstream 102338 23253587 ~ 23258467 (-) False angel2
XM_036985053.1 mRNA upstream 102338 23253587 ~ 23258468 (-) False angel2
TU781111 other downstream 985416 22159030 ~ 22161042 (-) False G685953
TU780899 other downstream 1221550 21920427 ~ 21924908 (-) False LOC110529207
TU780900 other downstream 1221550 21920427 ~ 21924908 (-) True LOC110529207
TU779858 other downstream 1667255 21478766 ~ 21479203 (-) True G684844
TU776244 other downstream 4354321 18791230 ~ 18792137 (-) True G681659
TU783285 other upstream 465658 23616907 ~ 23621246 (-) True LOC110529643
TU783300 other upstream 484060 23635309 ~ 23637408 (-) True G687890
TU783403 other upstream 603583 23754832 ~ 23756910 (-) True G687979
TU783552 other upstream 836850 23988099 ~ 23988854 (-) True G688109
TU783833 other upstream 1273814 24425063 ~ 24425553 (-) False G688366

Expression Profile