RNA id: XM_036985054.1


Basic Information

Item Value
RNA id XM_036985054.1
length 2486
RNA type mRNA
GC content 0.51
exon number 9
gene id angel2
representative True

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 23253587 ~ 23259122 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

ACTACATAAATATTGTATGATGCTACTGTTTCCAGCACAGCACTGGCAGCTCGGTCGGCATTACCAGCATCTTCCAGTGCGGTGCAGCGACACATCAGCCCAGTGAGGAATAGACCACAATGTACCACATATCAATGGATTTACAAAGACAGATGAACGTCAAGAGGTGTTGACCGCAACACGGCTTAAAGGGAAGGATTTGAGAATAAATAGCCTAATAACCACTCACTCAAAGGAAATGCCTGGCTAACTTCTATGGGTAAACGATCATTCGCAGTCAACCCATGTTTTCTCGACACCTGACCGCGTTTGGCTCTCACTGGTTGCCCCCAACTCAGGCCCCATTGGGCGGCTGGAGGAACGTACATTTCCCCAGTTATCCATGTCGGCCGGGTGTGCCCCCTCCACCTCAACTCTCCCATCCCACCAGGCACCTCTCAGGGGCCTTCCAACCTCAAGATACCCATAACACCAACTGGGCAAGACTACAGTCCAAACAACACCTCCCACCAGGGTTCCCTTTTCACGGTTTTCCTCATCGACACTTCCAACTTGGACTGATGGAGTGCTCAGACAAGGAGCCTCCATACAAGCGGAGGAGGAGTTCAGATGAGAGGGCACCAGGGGATAGATCCAAGGGCTCCCCCAAACGAGAGTACGCACCAAGACAGGCTCGCAGTGCCGCAACCAGCCCCAACTGCTGGTTCAAAGACGGGAAACCACCGCCTCCTGGGACAAGTCCACCAAGACAGGCATTGGAGCTGAAGAGACAATGGGAGGACTTTTCACACTGCTATAAGTCCAGACCCCAGTCTGGTGGTGGGAGGCGAGAACCACCCTTTGAGTTTTCTGTGATGTCGTATAACATCCTCTCCCAGGACCTACTACATGACAATAACTACCTGTACAAACACTGTAGCTCCTCCATCCTCAACTGGAATCACAGGCTCTCCAACATCCTGAAAGAGCTCAAAGAGCACAACGCAGATATAATGTGTCTGCAGGAGGTTCAAGAGGACCACTATGAAAAACAGATCAAACCCTCTCTAGAAGCATTAGGTTACCAGTGTGAGTACAAGAGGAGGACAGGCAGGAAGCCTGACGGCTGTGCCGTGGTCTATAAGAAGGACCGCTTCTCCCTGCTGTCCAGTCACCCAGTGGAGTACTTCCGCCGGGGCATCCCCCTGCTAGACCGGGATAACGTGGGCTTGGTGCTGTTACTGCGCCCCACGGGATCCTCCAGGCCGGAGGACTGCGTTTGTGTGGCCAATACACACCTCCTGTACAACCCCCGGCGCGGGGACATTAAGCTGGCCCAGTTGGCCATGCTGCTGGCAGAGATCAGTACAGTGTCCCGCCTCCCTGACGGCAGCTCCTGTCCCATCATCCTCTGTGGGGACTTTAACTCTGTGCCCTGGTCTCCCCTGTACAGCTTTGTTAGGGAGAGCAGGCTGGAGTACGACGGTATTCCCATAGGCAAGgtgtcagGGCAGGAGGAGAATCCCAGAGGCCAGCGGATCCTGACCGTGCCCATTTGGCCCCTTAGCCTGGGCGTCACCCAGCAGTGCCAGTATGCGACTGCCCCTACAGATGTTGACAGGGGAATCACCAACCTGTCTGTGCAGGACTTTGCAGAACCACCTATGGCAGCTATGAACAGACCCAGTATAGAGCACAGTCTGAGGCTGACGTCAGCTTACTCCCACTACCTGACAGAGGACAGCAGGCCTGAGATCACCACCTGTCACTCCAGGACAGCCATCACTGTGGACTACATCTTTTACTCTGCAGGAACTGGGGACATTTCCACTCAGCCAGCCATGTCTGTTTTCCTCCCAGAGGGTCCATTGCCAAGACATGGGCTGCAGCTGCTGGCCAGACTGGCCCTGgtgggacagacagacctggAGGCCGTCAACGGGCTGCCCAATGAGCACAACTCCTCCGACCACCTGCCCATACTAGCCTGCTTCCGCCTCTGCCCCTGAGGCTGGATGTTAGGGTTCAGGGGTTAGCGCCTTGGACAGAACTGGGGGTCAAAGACCTGGGGAGACCCATAAATCCATCCATACCGCTCACCAGCAGCCAAACACCAATTGTACACAAGCTCACCATGGCTTTTGTCTCTCATCTCTCAAGATCTCATATCCCCAGGAAATGTTGGAAaggtacaaacactgacactgGTAGATGTTGAACTTTAATTTCAAAGACATTATTGATGAATTTGGAGCTTTGCAGTGGCCTGACTCTAGTGTGTAGATCTAGGCTACTGCATCAAGATGTTTACACATTTTAACTTTTTCGTGTTATTTTTACATTGGTTGAAGATATGAAAATAGACACTTTTAGATTTGAATGATTTTATAAATGTtgataaattcatttaaaaaaaatatatatatatatcttaattATGTCATGCAAGTACTATTGGGTTTGATAATTAGCAAAAATGAATGCAAAGTACTTACCAAGgaagtatt

Function

GO: NA

KEGG:

id description
K18729 ANGEL; protein angel

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU782390 lncRNA downstream 3847 23245556 ~ 23249740 (-) True G687075
TU782325 lncRNA downstream 44772 23207872 ~ 23208815 (-) True G687024
TU782345 lncRNA downstream 64369 23189015 ~ 23189218 (-) True G687044
TU782342 lncRNA downstream 67196 23186158 ~ 23186391 (-) True G687041
TU782335 lncRNA downstream 79271 23173971 ~ 23174316 (-) True G687034
TU782330 lncRNA upstream 16698 23275820 ~ 23277349 (-) True G687029
TU782438 lncRNA upstream 88079 23347201 ~ 23347874 (-) True G687121
TU782454 lncRNA upstream 109232 23368354 ~ 23369103 (-) True G687137
TU782452 lncRNA upstream 144179 23403301 ~ 23405523 (-) True G687135
TU782472 lncRNA upstream 162544 23421666 ~ 23422179 (-) True G687155
XM_021612009.2 mRNA downstream 51354 23199930 ~ 23202233 (-) True nsl1
XM_021612008.2 mRNA downstream 51364 23199511 ~ 23202223 (-) False nsl1
XM_021614354.2 mRNA downstream 55337 23192564 ~ 23198250 (-) True batf3
XM_021611998.2 mRNA downstream 102338 23146463 ~ 23151249 (-) False adat2
XM_021612019.2 mRNA upstream 1066 23260188 ~ 23365791 (-) True galnt14
XM_021612024.2 mRNA upstream 268508 23527630 ~ 23582982 (-) False LOC110529641
XM_036985067.1 mRNA upstream 355816 23614938 ~ 23620558 (-) False LOC110529643
XM_021612028.2 mRNA upstream 355816 23614938 ~ 23621822 (-) False LOC110529643
XM_036985069.1 mRNA upstream 355816 23614938 ~ 23621882 (-) False LOC110529643
TU781111 other downstream 1092545 22159030 ~ 22161042 (-) False G685953
TU780899 other downstream 1328679 21920427 ~ 21924908 (-) False LOC110529207
TU780900 other downstream 1328679 21920427 ~ 21924908 (-) True LOC110529207
TU779858 other downstream 1774384 21478766 ~ 21479203 (-) True G684844
TU776244 other downstream 4461450 18791230 ~ 18792137 (-) True G681659
TU783285 other upstream 357785 23616907 ~ 23621246 (-) True LOC110529643
TU783300 other upstream 376187 23635309 ~ 23637408 (-) True G687890
TU783403 other upstream 495710 23754832 ~ 23756910 (-) True G687979
TU783552 other upstream 728977 23988099 ~ 23988854 (-) True G688109
TU783833 other upstream 1165941 24425063 ~ 24425553 (-) False G688366

Expression Profile