RNA id: XM_036985210.1



Basic Information


Item Value
RNA id XM_036985210.1
length 6446
RNA type mRNA
GC content 0.41
exon number 5
gene id nudt14
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 27391717 ~ 27483687 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


CTTATTCTCCACTACGACCTGCGGTTTGTGCTTTCTGTTGTGGTGAGAAACACCGGTGGGCAGCTAGCAGTCTGAACTATGGAGCAGATAAATGATATCCAGGTCGTTCCGTGCACCAGCTCCAATTATCTAAAACCATTCAGGGTGCACTATAGCCAGAATGGGACAAAGAAATCGTGGGACTTCATGCGAACACATGACAGTGTTTCGGTTCTGATCTTCAACACCACCTCGCACTGCTTCGTCTTGGTCAAGCAGTTCCGCCCAGcTGTGTACATGTGCGAGTGGGAGAGGACCAAGCCCAAGGCACCTGACTCTAGCGAGCAGGTGgcggaggagaaagagggggctGCGGTTGGGGGCGGGGAGACGCCCCCAGGCTCAGTGGGGATGACCTATGAGCTTTGCGCTGGCCTGGTGGACAAGGCTGACCTGTCGCTGGAAGAGATCGCCAGGCaggaggtactggaggagtgtGGCTACGACGTTCCAGTCGCCAAGCTGCGGAGGATCACCTCATACAGGTCCGGTGTTGGCGTGACGGGTGCCAAGCAGACCATGTTCTACGCCGAGGTGTCGGACGAGAACTGTGTGGGTGAGGGCGGCGGCGAGCCACAGGAGGGCGAATTGATCGAGGTGGTGAAGGTGCCCCTCCACGAGGCCATGACCTTTGCCTATGATGAGAGCATCCCCAAGACCATGGGCGTCATTTTCAGTTTCATCTGGTTCCACAACAACATGTCGCCCAAGTACAAGATCTCCACCAACGTTTAACCCACCCAACAACACCTGTCCCCTTCCCTGCCCCCTTCAGCCTGAGGTGGAAGTTGCAGTTAACCACAGATCTGGGATCAATGACCCTAACCCCTAGGCCTAATCTATACAATTAGGGGGATGGAGAAAAAAATCTGACCCTTTGTCAGTGGTTAGGGACAACTTCAATCTACTCCCAATCCCTTCGCCTTTGCCCGTATCCATATAAGTTGGCCCCAGGGGGACCATTTTTTTTCTCGTTACTAACTGTTATTTTTCAGAGGTTTGTCTCATTCTTTTTTACGTGGTCTTTAGTACTTTTCCTCTAAAACTTGCCATATGCTGGTGGCCAGCAGCACTTTTTGTTGTTAGTTTTCACTGTAAATGTATTACCTTTTCCTCACTGAGAGGTCCAGGGTGCAATCTCACGAAGATGGCTACATGATAGCGCTCTCGTTTGGAGCTGCTTGTCTACCGTTGATTGGATCATGTTCCAGGAATGCAAAAATGTTGTTGCTTAGTCAGCGCCAGGGCTTATTACATACGAGGGCCATTGCTGAGTCTGTTCGATTACTGCAGCTGGTTCAGGCGCGCCTTGCTTATTTTCTCCACAATCTACTCAGCCTCGAAGCCAGTGTTTCCCAGTCTTGGAGCGGTGCCGATTTTATCCCAGCCCAGCACTAGCATACCTGATTCCACTAATTATTATGGCTTCATGGTCAGGTGAGTTATTGCTGGGCTAAAACAAAAATCTGCTCACCTTTTGGATCCACCTGGACCGGGATTGGGAAACACTTCTCTAAGCAATACTTGATAGCTGGTAGTTTGATCATGGTCTGATTTTAAAACAAACATTTCAGTTAGCAGAGGTGATTAGATAAGTTGTAAGCATTGCAATGATTCCAGGGGTGTCACTACAGTAGTGTGTGCTCCTATGAGGTCCCATTAAGTTGTACGTTCGATAGAGGCTTCTTTTAACTACCACGGGAATATGACCTACCTCTACACTGGGGAGATTTATTACAGTAACAAATGTTGTCACTATACTAACACCACAATACTCAGTATCACAATACTCGAAAGTATTGTAATATCATGATACTTCTGAGTATCATGATACTGAGCATTTTGATAACACTAGTAACCACTATATCATTAATTGGGAAATTGTGAGAACCCTCTGGTGGACAATTTCTCTCACAATTATACCTGCATGTTAGCAGGAAGGCTTCACCGATATTGGCCGAGATCAAGAGCGTTATGTATATCTCAGACAGTGTTTTTGAGCAGGGTCAATGGGAGTTTTGTTTTAGGAAACTGAAAACCTAGCTTGTAACATGTAGGAGGAAGTTTAGCATGCTACTTGACCCAGCTTCCTGGAACAGCACCCGGAGCCCTTAGTGTGTTTTGTGATCCCCCTTGTTATTTTGAACCTGACGGCAGGGGCGGAAGAGTTTTGTTGATACCAGCACCGTCTGTGAGGCTTGAAGTAAAATGGTTGCGCTTTTTAACCTGTGAATCTGAGAGACATGGCCCAACAGTTAGACAGACCCCTCTTTTCCCTATACCTGTTTTGGCCAGACCTCTTCAAAATACCCCCATTTCCACAGAAATCAACAACAGCAGCTATCCAAGTCTATGGAGGTTTGAAACTAGGGTTGCAATACAGGTTTTCACAGGTTTTTCAGATATCCCGGTTGGAGGATTCCCAGCTGGAGGATTCCCTCCTTGATGATTCCCTTCAGTTTTACTGGAAATcctccaactgggatttctgaAAAACCTAAGAACTCTGGGAATGGTTCTGCGATTTGCAACCCTATTTGGGACAGATGGCGCTTAAGACAACAATCAATCTCAAAAGCACTTGCTTAACATCTCAGGTCCAGACAGTTTCCCCCCCTTGACGAGGTAACATTCAGGGATCACCATTCTGCACCATCTTAGCCATATACTTTTTAACCATTGTGTATGGTCGTGATGTAGTGACATTTCTATATAGTTTGCAAATATTATGACCTGTTAAAGTCCTAAATGGTGAATTGACACATCTTCTCATGAAAAACCTTTCTTTTGGTAACATATAAGTGTGTGGATTCATGGccccttccacaataagttgttAAAAATCGATGAAGTGGTGGTGATATAAGAATCAAAACCAAATAGTTAGCAATTATAATTCAATTTCAGAACGATTGAAAATAAACTATTGGCTTAAATAAGTATCTTGGGTTCCTAACCGAAGGCCTAACAGCAAGGTCTAGTAGTTGGTAGAATAAGGAAACAGCAAGTGTCACTTTCAAATGTTCACTTGTTTTGGACTTGTACAGCTAGCTACCTAGTTCAACTTTGAACACATTGGGTTAAGCTTTATCTGAATTGGCCTGTAATTGCATTCTGGGTGTCATCATTCCATAGCCACGTAGGTCTTAACTTAGCAGTTGATGTAACATCAAAATATTATGCATGAACTTTGTTTACATTTGTGAAGACTGGCTCGGTTTCCCAGAGTTGTAAAAGAAGCCAGTTGTTACATTTGGTTAGGGGCAATTCCATGGTGACGGATAACTCATATTTCTACTTTCAAATGTATACttaacaaaaaccattgatttcaaagtttaacacaACTCTATGCACGAGGACTACTTTAAACAATTTCcattgaacattttacaaaaacacatttagagGAAGAACTGTGCAGGTACACATTTTGGTAACCGAgtaaaactgagggagattttactgtAATTCTTTTACCAAACTTTAATCTGCAGCTTTTCCTTTTTTTTATGTACTGTGTAAATGATTCAAAGCagtcattgtgcatagagttgtatggtttgttactTTGATATCAAtagtttttgtttggcatacattgtAAAGTGAAAAACCTGAGACTCAGCGTAATTCCGTCACCATAGAATTGCCGTTATCTGATGTCTTCTCAGACAGAGAACCAGTTTAACACCAGAAAATAACGTATTTTTTTGCCCAGCCAGCTGGTTTGATGGTCCAACTGTTACAAGCCACAGTTTATCTTTCGAATGAACAATTAATCTGTAAGGCTCTTACTGCACTGTACATTTCCTGACAGATTTGAGATGCAACTAATACACTCTAGTCCACTGCTGTTCGCCGTGTGAGTAGCACAGCCGTTGTTCGGACTCAATATTTGTTGGGGAAATCAGAGTAAAGCCCAGGTATATCACGTTGAAACGAGTGACCTCTATAATAATGGTGTGTGGATAGATGGAGTATGTCAGTAATGATGATGCTGTTAGATAGCAAGGTAAACTGTTAAATCGTTTTAACCAGGCGTGTTTGCCTTACCATAACATTgaaaagggagggggggaggactTGATCAAAGTCCTATTGACCTCAAAAGGACTGGACTGCGGTCTTCCATAGCCAAGGTGGGCCCTTTCCCCTGAGCATGTAGTTTCCCCAAATTTATTCTTCCTCCCTCTATTTGGAATCATTCGTCAATCAAGTATCAGGATTTAATGTTTTTTTCTGGAATGGCTAGAATTTATTTTACAGAGGATAAAAAGATGACCCTATACTCATGCTAGTCAGCTTGATAGTTTTACAGTTTATACAAATAGCAGAACAGACACATTTTTCTTTACTCTTTCGCTCTTGAAGGCTTTAACATGTATGAGTTTTGTCCTTCCTTTGCGCCGCTGATTGAATCATGGTAATATTTCTAAGGTGAAATTGGGTTAGGCGTTGAAGGCTAAAAGTGTTATCAGGGAACTATCGTAACTTAGTTGTCTTAACCATTACAGTTTCTCCCGTAAAGATGGAGTCCACTGTATGGGAAACAATGTCCGCCACTATCCCCTCCATGGACGTTGTTATTGTTTGTTGCCTAAGTGGAGGTGAGGAGCGTTGCCCCAACGTGGTTTTAAAAAAATGCAGTACATATTCTGATGTTCTATCGTGCGTGCAATGATGTCCGGAGGGGAAAACAGTGTTCGTTGTTTGCAGTGACttcttgttgttgtaatatcaaaAACGGATATGACTGTTTAACCATTAAGGAGCCCAGCTTTAAATCTATAACCCCAGACTTGAACACACTGTCCCCTCTGCCTTTGTTCCTATGAGACAATATTTTATTTGATGTCTGCCTTCATTCAAATCCAGATGAGTTAGATTTTGGTAAGACAAAATCTTAACTGAGAACTCCACCAAAAGTTGTTGTTGGCGCTTACCCTCCTACCTTTTGGATGGTCTTGATTTGTACAGCTGTAACTCATGTGTTTTAAGGACTAATACTCTGTATAAGTTTACATAGCAGTACATTGGTGCCTTATGTCATAAGGTATCAAACCCTTTCACTGGCCCAATCTGTAATTTTAACAGCCTAGTCACTTTGTTTGGAAAAGTGAGGGATGGGGCTTCGAAGTAACCCCTCAAATTCATAGACTGACCTACAGATGCAAGGAGCGACAGTCAGTGAGAGCAACATGATCATTAAAGGAAATATTTTGTAGCTATGCATTGTTTACGACAAAGATGATACATCATTGAGTAATACAATTGTAGATTTGGGGCTATGATGGAGTAAGACAGTTGTACCAAgttgggtacatatcattaatcgAAGTTACAATTGAAAGACAGAACATACAGATTGCGCCTTTAACTGAAACCTATAAGCCATCAACAGTTTTTTGGTGAAGAGTCCAAATTTCTTAACATTGCCAGCACTGATGGTCTCTCAATCATGTCAATGCTGGATACTACCATAACATCATGCGACGATTATACCTCCATCACCGTGTGGCAAGTAGGCATGTCACACTGCATCATTGTAGCGCATACAGCATCGATGGcctatgtgaagaaaaaaaacaactaaaaaaaaaaaaaatctgcatttcGCGCGTGCTGGCATGCCCGTAAGGCACTAACATATCAAACGTTCCATGAATATCGGAAGTGTCAATTTCAGTGGAGTTCTCTTTGGGATAGAATGCATCTTATATCTCCCTTTCAATACATACTTGTTTGATACCACTTTTTTGGGTACTCTGTCTTGATATTGCAACTGTTTATTTTTTCAACGGTACCTTTCTGAGAGCATGGAATATTGTTTTGTGATAGATGAGAGCaagacaaaaaaatacatttatttttcattttatttgacaATTCAAATGCTTGACGAGTATTTTCAGTATCCATTGCAAGCAACGAGGTTGTGACTATCAGTTATTGCTTATGTTCTCAAGAAAGGGTGTTTTAAATTGTAGTTTCTATTTAACACCCCTGATTTATTTTAGTTTATGCATTTATTGTCGGTTATACTGCAAAGCAATTTGTTCAATTGTGAATTTTTTTGTGTGTCTTACACGGAATTAGTGTTTTCTTTGGATTTATTCTCTGAGAAAGGATATCGACAAAGTTAAGTGTCAATGTTTCTTATCAGAGTTGTTCTGCTTTATTTGGAGTGAATTCATTGTGGTCTGTGTTTGAGTAATATTTCATGTTTTATATGTTTGACTTGATTTCGTAATTGTTCTTTTTCAAATATTTCACAATTTAAAAAAACCCTACTTATGGCACTTggtgcaaatatatatatttaaatattatATTTTGCATGTGCACTAACTGTTTCATTGAACTGCATTAAGTGTAAATAAAAGAGGGTTGATGcctaaatcatg

Function


GO:

id name namespace
GO:0046872 metal ion binding molecular_function
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides molecular_function

KEGG:

id description
K08077 NUDT14; UDP-sugar diphosphatase

JBrowse2


Loading

Neighbor


RNA id RNA type direction distance location representative gene id
TU787092 lncRNA upstream 57480 27333912 ~ 27334237 (+) True G691311
TU787079 lncRNA upstream 75791 27315569 ~ 27315926 (+) True G691299
TU787069 lncRNA upstream 88354 27298408 ~ 27303363 (+) True G691289
TU787067 lncRNA upstream 94563 27296890 ~ 27297154 (+) True G691288
TU787063 lncRNA upstream 99108 27292209 ~ 27292609 (+) True G691284
TU787913 lncRNA downstream 233456 27717143 ~ 27722189 (+) True G692096
TU787996 lncRNA downstream 240163 27723850 ~ 27724242 (+) True G692175
TU788002 lncRNA downstream 246221 27729908 ~ 27747038 (+) True G692181
TU788124 lncRNA downstream 361141 27844828 ~ 27845133 (+) True G692301
TU788125 lncRNA downstream 362341 27846028 ~ 27846301 (+) True G692302
XM_036985202.1 mRNA upstream 147539 27011159 ~ 27244178 (+) False LOC110529722
XM_036985203.1 mRNA upstream 147539 27011159 ~ 27244178 (+) False LOC110529722
XM_036985205.1 mRNA upstream 147539 27011159 ~ 27244178 (+) False LOC110529722
XM_036985206.1 mRNA upstream 147539 27011159 ~ 27244178 (+) False LOC110529722
XM_036985207.1 mRNA upstream 147539 27011159 ~ 27244178 (+) False LOC110529722
XM_021612192.2 mRNA downstream 14474 27498161 ~ 27602164 (+) False jag2b
XM_021612194.2 mRNA downstream 14474 27498161 ~ 27602164 (+) False jag2b
XM_036985218.1 mRNA downstream 426018 27909705 ~ 27914563 (+) False btbd6b
XM_036985216.1 mRNA downstream 426244 27909931 ~ 27914563 (+) False btbd6b
XM_036985217.1 mRNA downstream 426244 27909931 ~ 27914563 (+) True btbd6b
TU786082 other upstream 1008291 26381128 ~ 26383426 (+) True LOC110529706
TU785811 other upstream 1196173 26133191 ~ 26195544 (+) True LOC110529702
TU784988 other upstream 1709990 25678652 ~ 25681727 (+) False LOC110529690
TU784318 other upstream 2330267 25058953 ~ 25061450 (+) True G688823
TU784088 other upstream 2406891 24982729 ~ 24984826 (+) True G688613
TU787679 other downstream 72597 27556284 ~ 27557019 (+) True jag2b
TU788176 other downstream 412014 27895701 ~ 27895987 (+) True G692343
TU788158 other downstream 486789 27970476 ~ 27972016 (+) True xrcc3
TU788261 other downstream 586213 28069900 ~ 28070228 (+) True G692424
TU789022 other downstream 1011598 28495285 ~ 28558373 (+) True btbd7

Expression Profile


XM_036985210.1 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 15.
End of interactive chart.

XM_036985210.1 Expression in each Bioproject

Bar chart with 21 bars.
XM_036985210.1 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 300.
End of interactive chart.