Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU800488 |
| length | 595 |
| RNA type | TUCP |
| GC content | 0.52 |
| exon number | 6 |
| gene id | LOC110530908 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 37474229 ~ 37626960 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
37,485,000
37,486,000
37,487,000
37,488,000
37,489,000
37,490,000
37,491,000
37,492,000
37,493,000
37,494,000
37,495,000
NC_048572.1
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU800487 | lncRNA | downstream | 11935 | 37474752 ~ 37477292 (-) | True | G703648 |
| TU800482 | lncRNA | downstream | 16484 | 37470891 ~ 37472743 (-) | False | G703647 |
| TU800483 | lncRNA | downstream | 16484 | 37470891 ~ 37472743 (-) | True | G703647 |
| TU800457 | lncRNA | downstream | 46614 | 37442267 ~ 37442613 (-) | True | G703627 |
| TU800378 | lncRNA | downstream | 59404 | 37428107 ~ 37429823 (-) | True | G703548 |
| TU800492 | lncRNA | upstream | 6782 | 37498939 ~ 37506549 (-) | True | G703653 |
| TU800526 | lncRNA | upstream | 56770 | 37548927 ~ 37586929 (-) | True | G703684 |
| TU800895 | lncRNA | upstream | 258445 | 37750602 ~ 37750921 (-) | True | G704025 |
| TU800898 | lncRNA | upstream | 261310 | 37753467 ~ 37753666 (-) | True | G704028 |
| TU800908 | lncRNA | upstream | 268110 | 37760267 ~ 37760785 (-) | True | G704035 |
| XM_021612533.2 | mRNA | downstream | 32292 | 37425738 ~ 37456935 (-) | True | opn8a |
| XM_021612526.2 | mRNA | downstream | 127305 | 37355100 ~ 37361922 (-) | False | LOC110529880 |
| XR_005052873.1 | mRNA | downstream | 217967 | 37149323 ~ 37271260 (-) | False | LOC110529879 |
| XM_036985427.1 | mRNA | downstream | 218124 | 37149323 ~ 37271103 (-) | False | LOC110529879 |
| XR_005052870.1 | mRNA | downstream | 218124 | 37149323 ~ 37271103 (-) | False | LOC110529879 |
| XM_021612540.2 | mRNA | upstream | 290017 | 37782174 ~ 37792728 (-) | True | sod2 |
| XM_021612541.2 | mRNA | upstream | 325715 | 37817872 ~ 37851843 (-) | False | acbd3 |
| XM_021612543.2 | mRNA | upstream | 325715 | 37817872 ~ 37851844 (-) | False | acbd3 |
| XM_021612544.2 | mRNA | upstream | 325715 | 37817872 ~ 37851844 (-) | False | acbd3 |
| XM_021612545.2 | mRNA | upstream | 325715 | 37817872 ~ 37851844 (-) | True | acbd3 |
| TU800348 | other | downstream | 127634 | 37355096 ~ 37361593 (-) | True | LOC110529880 |
| TU798300 | other | downstream | 1571052 | 35900623 ~ 35918175 (-) | True | G701618 |
| TU798297 | other | downstream | 1584955 | 35900623 ~ 35904272 (-) | False | G701618 |
| TU798046 | other | downstream | 1783914 | 35641355 ~ 35705313 (-) | True | LOC110529865 |
| TU798044 | other | downstream | 1801591 | 35641355 ~ 35687636 (-) | False | LOC110529865 |
| TU801610 | other | upstream | 545568 | 38037725 ~ 38038346 (-) | True | G704702 |
| TU801790 | other | upstream | 821332 | 38313489 ~ 38313803 (-) | True | G704874 |
| TU803684 | other | upstream | 1727487 | 39219644 ~ 39226313 (-) | True | G706683 |
| TU804129 | other | upstream | 2464804 | 39956961 ~ 39959613 (-) | True | slc22a16 |
| TU806574 | other | upstream | 5227614 | 42719771 ~ 42720699 (-) | True | G709272 |
