Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU803109 |
| length | 1019 |
| lncRNA type | sense_over |
| GC content | 0.32 |
| exon number | 2 |
| gene id | usta |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 39800464 ~ 39953509 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0008152 | metabolic process | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0008146 | sulfotransferase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU803131 | lncRNA | upstream | 40413 | 39911563 ~ 39912043 (+) | True | G706156 |
| TU803129 | lncRNA | upstream | 49451 | 39902845 ~ 39903005 (+) | True | G706154 |
| TU803125 | lncRNA | upstream | 63014 | 39889194 ~ 39889442 (+) | True | G706150 |
| TU803097 | lncRNA | upstream | 113002 | 39838212 ~ 39839454 (+) | True | G706123 |
| TU803082 | lncRNA | upstream | 199689 | 39752246 ~ 39752767 (+) | True | G706108 |
| TU803193 | lncRNA | downstream | 69056 | 40022565 ~ 40022772 (+) | True | G706217 |
| TU803196 | lncRNA | downstream | 72722 | 40026231 ~ 40026492 (+) | True | G706220 |
| TU803203 | lncRNA | downstream | 78425 | 40031934 ~ 40032216 (+) | True | G706227 |
| TU803425 | lncRNA | downstream | 383199 | 40336708 ~ 40336919 (+) | True | G706441 |
| TU803427 | lncRNA | downstream | 389384 | 40342893 ~ 40343101 (+) | True | G706443 |
| XM_036985458.1 | mRNA | upstream | 156237 | 39463325 ~ 39796219 (+) | False | LOC110529898 |
| XM_021612557.2 | mRNA | downstream | 80423 | 40033932 ~ 40128526 (+) | True | LOC110529903 |
| XM_036985467.1 | mRNA | downstream | 212665 | 40166174 ~ 40323818 (+) | False | LOC110530920 |
| XM_036985465.1 | mRNA | downstream | 212667 | 40166176 ~ 40323818 (+) | False | LOC110530920 |
| XM_036985468.1 | mRNA | downstream | 212668 | 40166177 ~ 40323818 (+) | False | LOC110530920 |
| XM_036985469.1 | mRNA | downstream | 212668 | 40166177 ~ 40323818 (+) | False | LOC110530920 |
| TU802817 | other | upstream | 549160 | 39402948 ~ 39403296 (+) | True | G705853 |
| TU802471 | other | upstream | 950578 | 39000496 ~ 39001878 (+) | True | adgb |
| TU802209 | other | upstream | 1196151 | 38755871 ~ 38756305 (+) | True | G705273 |
| TU801178 | other | upstream | 1722482 | 38226055 ~ 38229974 (+) | True | G704281 |
| TU800686 | other | upstream | 2180821 | 37770864 ~ 37771635 (+) | True | G703835 |
| TU803252 | other | downstream | 144397 | 40097906 ~ 40102291 (+) | True | G706274 |
| TU803205 | other | downstream | 212699 | 40166208 ~ 40321292 (+) | False | LOC110530920 |
| TU803204 | other | downstream | 368064 | 40321573 ~ 40323773 (+) | True | LOC110530920 |
| TU805103 | other | downstream | 1133189 | 41086698 ~ 41167970 (+) | True | G708034 |
| TU805139 | other | downstream | 1327329 | 41280838 ~ 41281481 (+) | True | LOC110529918 |
