Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_005053023.1 |
| length | 398 |
| RNA type | mRNA |
| GC content | 0.43 |
| exon number | 3 |
| gene id | LOC118965613 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 43759329 ~ 43763318 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
43,758,000
43,759,000
43,760,000
43,761,000
43,762,000
43,763,000
43,764,000
43,765,000
43,766,000
43,767,000
43,768,000
43,769,000
NC_048572.1
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU807896 | lncRNA | downstream | 169445 | 43589655 ~ 43589884 (-) | True | G710490 |
| TU807894 | lncRNA | downstream | 171067 | 43587684 ~ 43588262 (-) | True | G710488 |
| TU807209 | lncRNA | downstream | 238532 | 43520425 ~ 43520797 (-) | True | G709835 |
| TU807033 | lncRNA | downstream | 378153 | 43380559 ~ 43381176 (-) | True | G709667 |
| TU807029 | lncRNA | downstream | 381665 | 43374947 ~ 43377664 (-) | True | G709663 |
| TU808198 | lncRNA | upstream | 280328 | 44043646 ~ 44043959 (-) | True | G710781 |
| TU808202 | lncRNA | upstream | 289712 | 44053030 ~ 44056352 (-) | True | G710785 |
| TU808219 | lncRNA | upstream | 304621 | 44067939 ~ 44068194 (-) | True | G710800 |
| TU808214 | lncRNA | upstream | 305545 | 44068863 ~ 44069201 (-) | True | G710795 |
| TU808212 | lncRNA | upstream | 307375 | 44070693 ~ 44071246 (-) | True | G710793 |
| XM_021612591.2 | mRNA | downstream | 157024 | 43599754 ~ 43602305 (-) | False | mycb |
| XM_021612593.2 | mRNA | downstream | 157024 | 43599754 ~ 43602305 (-) | True | mycb |
| XM_021612583.2 | mRNA | downstream | 1232743 | 42431791 ~ 42526586 (-) | True | puf60a |
| XM_021612585.2 | mRNA | downstream | 1232802 | 42431791 ~ 42526527 (-) | False | puf60a |
| XM_021612584.2 | mRNA | downstream | 1233660 | 42431791 ~ 42525669 (-) | False | puf60a |
| XM_021612600.2 | mRNA | upstream | 421675 | 44184993 ~ 44436559 (-) | False | efr3a |
| XM_021612601.2 | mRNA | upstream | 421675 | 44184993 ~ 44436559 (-) | False | efr3a |
| XM_021612602.2 | mRNA | upstream | 421675 | 44184993 ~ 44436559 (-) | True | efr3a |
| XR_002474453.2 | mRNA | upstream | 627560 | 44390878 ~ 44394639 (-) | True | LOC110529930 |
| XR_002474328.2 | mRNA | upstream | 1217651 | 44980969 ~ 44984268 (-) | True | LOC110529115 |
| TU806781 | other | downstream | 588247 | 43170760 ~ 43171082 (-) | True | G709454 |
| TU806574 | other | downstream | 1038630 | 42719771 ~ 42720699 (-) | True | G709272 |
| TU804129 | other | downstream | 3799716 | 39956961 ~ 39959613 (-) | True | slc22a16 |
| TU803684 | other | downstream | 4533016 | 39219644 ~ 39226313 (-) | True | G706683 |
| TU801790 | other | downstream | 5445526 | 38313489 ~ 38313803 (-) | True | G704874 |
| TU808567 | other | upstream | 775475 | 44538793 ~ 44539504 (-) | True | G711133 |
| TU810338 | other | upstream | 1694459 | 45457777 ~ 45458248 (-) | True | G712814 |
| TU811283 | other | upstream | 2547812 | 46311130 ~ 46325681 (-) | True | crfb16 |
| TU811888 | other | upstream | 3288149 | 47051467 ~ 47057660 (-) | True | LOC110529973 |
| TU812043 | other | upstream | 3415106 | 47178424 ~ 47178736 (-) | True | G714425 |
