Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021612610.2 |
| length | 4992 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 9 |
| gene id | retreg1 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 45509081 ~ 45601564 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|---|
| K23880 | RETREG; reticulophagy regulator |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU810340 | lncRNA | downstream | 46460 | 45459133 ~ 45462621 (-) | False | G712815 |
| TU810339 | lncRNA | downstream | 48098 | 45460080 ~ 45460983 (-) | True | G712815 |
| TU810336 | lncRNA | downstream | 52554 | 45455909 ~ 45456527 (-) | True | G712812 |
| TU810334 | lncRNA | downstream | 55765 | 45453032 ~ 45453316 (-) | True | G712810 |
| TU810333 | lncRNA | downstream | 56647 | 45452208 ~ 45452434 (-) | True | G712809 |
| TU810482 | lncRNA | upstream | 55612 | 45657176 ~ 45711563 (-) | False | G712949 |
| TU810481 | lncRNA | upstream | 106338 | 45707902 ~ 45711563 (-) | True | G712949 |
| TU810501 | lncRNA | upstream | 110531 | 45712095 ~ 45712403 (-) | True | G712967 |
| TU810502 | lncRNA | upstream | 111052 | 45712616 ~ 45712839 (-) | True | G712968 |
| TU810503 | lncRNA | upstream | 111982 | 45713546 ~ 45713820 (-) | True | G712969 |
| XM_021612609.2 | mRNA | downstream | 13980 | 45485018 ~ 45495101 (-) | False | znf622 |
| XM_036985484.1 | mRNA | downstream | 13980 | 45485018 ~ 45495101 (-) | True | znf622 |
| XM_021612608.2 | mRNA | downstream | 13981 | 45485018 ~ 45495100 (-) | False | znf622 |
| XM_021612606.2 | mRNA | downstream | 335340 | 45122083 ~ 45173741 (-) | True | basp1 |
| XR_002474328.2 | mRNA | downstream | 524813 | 44980969 ~ 44984268 (-) | True | LOC110529115 |
| XM_021612616.2 | mRNA | upstream | 77295 | 45678859 ~ 45684992 (-) | True | nol7 |
| XM_021612624.2 | mRNA | upstream | 191684 | 45793248 ~ 45924729 (-) | False | amph |
| XM_021612626.2 | mRNA | upstream | 191684 | 45793248 ~ 45924729 (-) | False | amph |
| XM_021612621.2 | mRNA | upstream | 191684 | 45793248 ~ 45924730 (-) | False | amph |
| XM_021612622.2 | mRNA | upstream | 191684 | 45793248 ~ 45924730 (-) | False | amph |
| TU810338 | other | downstream | 50833 | 45457777 ~ 45458248 (-) | True | G712814 |
| TU808567 | other | downstream | 969577 | 44538793 ~ 44539504 (-) | True | G711133 |
| TU806781 | other | downstream | 2337999 | 43170760 ~ 43171082 (-) | True | G709454 |
| TU806574 | other | downstream | 2788382 | 42719771 ~ 42720699 (-) | True | G709272 |
| TU804129 | other | downstream | 5549468 | 39956961 ~ 39959613 (-) | True | slc22a16 |
| TU811283 | other | upstream | 709566 | 46311130 ~ 46325681 (-) | True | crfb16 |
| TU811888 | other | upstream | 1449903 | 47051467 ~ 47057660 (-) | True | LOC110529973 |
| TU812043 | other | upstream | 1576860 | 47178424 ~ 47178736 (-) | True | G714425 |
| TU813564 | other | upstream | 2687378 | 48288942 ~ 48289581 (-) | True | G715865 |
| TU813956 | other | upstream | 2940727 | 48542291 ~ 48616523 (-) | True | dlg1l |
