Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021612636.2 |
| length | 3389 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 10 |
| gene id | tmeff1a |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 46163653 ~ 46241437 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
46,160,000
46,170,000
46,180,000
46,190,000
46,200,000
46,210,000
46,220,000
46,230,000
46,240,000
46,250,000
46,260,000
46,270,000
46,280,000
46,290,000
46,300,000
46,310,000
NC_048572.1
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU810763 | lncRNA | downstream | 26715 | 46136731 ~ 46136938 (-) | True | G713211 |
| TU810754 | lncRNA | downstream | 41922 | 46121282 ~ 46121731 (-) | True | G713202 |
| TU810755 | lncRNA | downstream | 42832 | 46120054 ~ 46120821 (-) | True | G713203 |
| TU810753 | lncRNA | downstream | 43839 | 46116676 ~ 46119814 (-) | True | G713201 |
| TU810714 | lncRNA | downstream | 126193 | 46037246 ~ 46037460 (-) | True | G713164 |
| TU810839 | lncRNA | upstream | 421 | 46241856 ~ 46242057 (-) | True | G713287 |
| TU810845 | lncRNA | upstream | 4630 | 46246065 ~ 46246429 (-) | True | G713293 |
| TU811239 | lncRNA | upstream | 13041 | 46254476 ~ 46339044 (-) | True | G713660 |
| TU811246 | lncRNA | upstream | 22945 | 46264380 ~ 46272772 (-) | True | G713667 |
| TU811275 | lncRNA | upstream | 113224 | 46354659 ~ 46424529 (-) | True | G713694 |
| XM_021612635.2 | mRNA | downstream | 29665 | 46122744 ~ 46133988 (-) | True | cavin4a |
| XM_021612634.2 | mRNA | downstream | 89607 | 46061743 ~ 46074046 (-) | False | ift57 |
| XM_036985498.1 | mRNA | downstream | 89633 | 46062481 ~ 46074020 (-) | True | ift57 |
| XM_021612631.2 | mRNA | downstream | 130653 | 46006411 ~ 46033000 (-) | True | tmem71 |
| XM_036985495.1 | mRNA | downstream | 238923 | 45793248 ~ 45924730 (-) | False | amph |
| XM_021612641.2 | mRNA | upstream | 68297 | 46309732 ~ 46325685 (-) | False | crfb16 |
| XM_036985500.1 | mRNA | upstream | 68297 | 46309732 ~ 46325685 (-) | False | crfb16 |
| XM_036985501.1 | mRNA | upstream | 147507 | 46388942 ~ 46395118 (-) | False | LOC110529956 |
| XM_036985502.1 | mRNA | upstream | 147507 | 46388942 ~ 46395118 (-) | True | LOC110529956 |
| XM_021612647.2 | mRNA | upstream | 166298 | 46407733 ~ 46417579 (-) | True | dusp28 |
| TU810338 | other | downstream | 705405 | 45457777 ~ 45458248 (-) | True | G712814 |
| TU808567 | other | downstream | 1624149 | 44538793 ~ 44539504 (-) | True | G711133 |
| TU806781 | other | downstream | 2992571 | 43170760 ~ 43171082 (-) | True | G709454 |
| TU806574 | other | downstream | 3442954 | 42719771 ~ 42720699 (-) | True | G709272 |
| TU804129 | other | downstream | 6204040 | 39956961 ~ 39959613 (-) | True | slc22a16 |
| TU811283 | other | upstream | 69695 | 46311130 ~ 46325681 (-) | True | crfb16 |
| TU811888 | other | upstream | 810032 | 47051467 ~ 47057660 (-) | True | LOC110529973 |
| TU812043 | other | upstream | 936989 | 47178424 ~ 47178736 (-) | True | G714425 |
| TU813564 | other | upstream | 2047507 | 48288942 ~ 48289581 (-) | True | G715865 |
| TU813956 | other | upstream | 2300856 | 48542291 ~ 48616523 (-) | True | dlg1l |
