Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021612670.2 |
| length | 2266 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 12 |
| gene id | dnajc1 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 47027194 ~ 47035362 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0005634 | nucleus | cellular_component |
| GO:0003677 | DNA binding | molecular_function |
| GO:0003682 | chromatin binding | molecular_function |
| id | description |
|---|---|
| K09521 | DNAJC1; DnaJ homolog subfamily C member 1 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU811880 | lncRNA | downstream | 11383 | 47015599 ~ 47015811 (-) | True | G714271 |
| TU811871 | lncRNA | downstream | 16925 | 47003967 ~ 47010269 (-) | True | G714262 |
| TU811875 | lncRNA | downstream | 25509 | 47001045 ~ 47001685 (-) | True | G714266 |
| TU811874 | lncRNA | downstream | 26495 | 47000483 ~ 47000699 (-) | True | G714265 |
| TU811872 | lncRNA | downstream | 28550 | 46998395 ~ 46998644 (-) | True | G714263 |
| TU811886 | lncRNA | upstream | 665 | 47036027 ~ 47036317 (-) | True | G714276 |
| TU811893 | lncRNA | upstream | 9342 | 47044704 ~ 47045355 (-) | False | G714279 |
| TU811892 | lncRNA | upstream | 9400 | 47044762 ~ 47045496 (-) | True | G714279 |
| TU811904 | lncRNA | upstream | 34214 | 47069576 ~ 47069788 (-) | True | G714290 |
| TU811910 | lncRNA | upstream | 40498 | 47075860 ~ 47076089 (-) | True | G714296 |
| XM_021612671.2 | mRNA | downstream | 119 | 47015885 ~ 47027075 (-) | False | nebl |
| XR_002474465.2 | mRNA | downstream | 119 | 47017536 ~ 47027075 (-) | True | nebl |
| XM_036985505.1 | mRNA | downstream | 224025 | 46651828 ~ 46803169 (-) | True | pex5lb |
| XM_021612661.2 | mRNA | downstream | 224026 | 46651828 ~ 46803168 (-) | False | pex5lb |
| XM_036985507.1 | mRNA | downstream | 224026 | 46651828 ~ 46803168 (-) | False | pex5lb |
| XM_021612673.2 | mRNA | upstream | 15711 | 47051073 ~ 47057707 (-) | False | LOC110529973 |
| XM_021612672.2 | mRNA | upstream | 15711 | 47051073 ~ 47067973 (-) | False | LOC110529973 |
| XM_021612689.2 | mRNA | upstream | 194725 | 47230087 ~ 47260839 (-) | False | LOC110529976 |
| XM_021612686.2 | mRNA | upstream | 194725 | 47230087 ~ 47260840 (-) | False | LOC110529976 |
| XM_021612688.2 | mRNA | upstream | 194725 | 47230087 ~ 47260840 (-) | False | LOC110529976 |
| TU811283 | other | downstream | 701513 | 46311130 ~ 46325681 (-) | True | crfb16 |
| TU810338 | other | downstream | 1568946 | 45457777 ~ 45458248 (-) | True | G712814 |
| TU808567 | other | downstream | 2487690 | 44538793 ~ 44539504 (-) | True | G711133 |
| TU806781 | other | downstream | 3856112 | 43170760 ~ 43171082 (-) | True | G709454 |
| TU806574 | other | downstream | 4306495 | 42719771 ~ 42720699 (-) | True | G709272 |
| TU811888 | other | upstream | 16105 | 47051467 ~ 47057660 (-) | True | LOC110529973 |
| TU812043 | other | upstream | 143062 | 47178424 ~ 47178736 (-) | True | G714425 |
| TU813564 | other | upstream | 1253580 | 48288942 ~ 48289581 (-) | True | G715865 |
| TU813956 | other | upstream | 1506929 | 48542291 ~ 48616523 (-) | True | dlg1l |
| TU814203 | other | upstream | 1724550 | 48759912 ~ 48761163 (-) | True | G716463 |
