Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU812942 |
| length | 1261 |
| lncRNA type | sense_over |
| GC content | 0.39 |
| exon number | 2 |
| gene id | LOC110529987 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 47726790 ~ 47894176 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
47,726,000
47,726,400
47,726,800
47,727,200
47,727,600
47,728,000
47,728,400
47,728,800
47,729,200
47,729,600
47,730,000
47,730,400
47,730,800
47,731,200
47,731,600
47,732,000
47,732,400
NC_048572.1
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU812778 | lncRNA | downstream | 1736 | 47725034 ~ 47725335 (-) | True | G715115 |
| TU812774 | lncRNA | downstream | 4274 | 47722559 ~ 47722797 (-) | True | G715111 |
| TU812773 | lncRNA | downstream | 4759 | 47722069 ~ 47722312 (-) | True | G715110 |
| TU812770 | lncRNA | downstream | 5897 | 47720814 ~ 47721174 (-) | True | G715107 |
| TU812768 | lncRNA | downstream | 6838 | 47719750 ~ 47720233 (-) | True | G715105 |
| TU812943 | lncRNA | upstream | 1611 | 47729966 ~ 47730419 (-) | True | LOC110529987 |
| TU812960 | lncRNA | upstream | 22725 | 47751080 ~ 47751725 (-) | False | G715292 |
| TU812959 | lncRNA | upstream | 22848 | 47751203 ~ 47751725 (-) | True | G715292 |
| TU813001 | lncRNA | upstream | 86970 | 47815325 ~ 47815939 (-) | True | G715330 |
| TU813006 | lncRNA | upstream | 94743 | 47823098 ~ 47823383 (-) | True | G715335 |
| XR_002474329.2 | mRNA | downstream | 71003 | 47655052 ~ 47656068 (-) | True | LOC110529117 |
| XR_005052884.1 | mRNA | downstream | 287129 | 47397783 ~ 47439942 (-) | False | LOC110529981 |
| XM_021612708.2 | mRNA | upstream | 601329 | 48329684 ~ 48343010 (-) | True | LOC110529989 |
| XM_036985531.1 | mRNA | upstream | 627649 | 48356004 ~ 48429216 (-) | False | dlg1l |
| XM_036985532.1 | mRNA | upstream | 627649 | 48356004 ~ 48429216 (-) | False | dlg1l |
| XM_021612717.2 | mRNA | upstream | 627649 | 48356004 ~ 48486048 (-) | False | dlg1l |
| XM_021612729.2 | mRNA | upstream | 627649 | 48356004 ~ 48515295 (-) | False | dlg1l |
| TU812043 | other | downstream | 548335 | 47178424 ~ 47178736 (-) | True | G714425 |
| TU811888 | other | downstream | 669411 | 47051467 ~ 47057660 (-) | True | LOC110529973 |
| TU811283 | other | downstream | 1401390 | 46311130 ~ 46325681 (-) | True | crfb16 |
| TU810338 | other | downstream | 2268823 | 45457777 ~ 45458248 (-) | True | G712814 |
| TU808567 | other | downstream | 3187567 | 44538793 ~ 44539504 (-) | True | G711133 |
| TU813564 | other | upstream | 560587 | 48288942 ~ 48289581 (-) | True | G715865 |
| TU813956 | other | upstream | 813936 | 48542291 ~ 48616523 (-) | True | dlg1l |
| TU814203 | other | upstream | 1031557 | 48759912 ~ 48761163 (-) | True | G716463 |
| TU814220 | other | upstream | 1053766 | 48782121 ~ 48782515 (-) | True | G716480 |
| TU814229 | other | upstream | 1060166 | 48788521 ~ 48788962 (-) | True | G716488 |
