Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021612754.2 |
| length | 3157 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 4 |
| gene id | LOC110530004 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 49601539 ~ 49612229 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0038032 | termination of G protein-coupled receptor signaling pathway | biological_process |
| GO:0007601 | visual perception | biological_process |
| GO:0007603 | phototransduction, visible light | biological_process |
| GO:0006468 | protein phosphorylation | biological_process |
| GO:0016020 | membrane | cellular_component |
| GO:0005524 | ATP binding | molecular_function |
| GO:0009881 | photoreceptor activity | molecular_function |
| GO:0050254 | rhodopsin kinase activity | molecular_function |
| GO:0004703 | G protein-coupled receptor kinase activity | molecular_function |
| id | description |
|---|---|
| K00909 | GRK1_7; rhodopsin kinase |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU815305 | lncRNA | downstream | 7795 | 49591230 ~ 49593744 (-) | True | G717525 |
| TU815351 | lncRNA | downstream | 22924 | 49577761 ~ 49578615 (-) | True | LOC118965614 |
| TU815345 | lncRNA | downstream | 27441 | 49573848 ~ 49574098 (-) | True | G717565 |
| TU815340 | lncRNA | downstream | 33963 | 49567369 ~ 49567576 (-) | True | G717560 |
| TU815336 | lncRNA | downstream | 42457 | 49558865 ~ 49559082 (-) | True | G717556 |
| TU815397 | lncRNA | upstream | 17363 | 49629592 ~ 49630539 (-) | True | LOC110530005 |
| TU815382 | lncRNA | upstream | 38362 | 49650591 ~ 49683675 (-) | True | G717596 |
| TU815408 | lncRNA | upstream | 55507 | 49667736 ~ 49672776 (-) | True | G717617 |
| TU815413 | lncRNA | upstream | 65988 | 49678217 ~ 49683069 (-) | True | G717622 |
| TU816338 | lncRNA | upstream | 129556 | 49741785 ~ 49742817 (-) | True | G718461 |
| XR_005053024.1 | mRNA | downstream | 22732 | 49577103 ~ 49578807 (-) | False | LOC118965614 |
| XM_021612751.2 | mRNA | downstream | 71853 | 49524738 ~ 49529686 (-) | True | LOC110530002 |
| XM_036985541.1 | mRNA | downstream | 110291 | 49442708 ~ 49491248 (-) | False | LOC110529999 |
| XM_036985542.1 | mRNA | downstream | 110291 | 49442708 ~ 49491248 (-) | False | LOC110529999 |
| XM_036985543.1 | mRNA | downstream | 110291 | 49442708 ~ 49491248 (-) | False | LOC110529999 |
| XR_002474470.2 | mRNA | upstream | 17348 | 49629577 ~ 49630769 (-) | False | LOC110530005 |
| XM_021612756.2 | mRNA | upstream | 23246 | 49635475 ~ 49647848 (-) | False | LOC110530006 |
| XM_036985551.1 | mRNA | upstream | 23246 | 49635475 ~ 49647848 (-) | True | LOC110530006 |
| XM_021612759.2 | mRNA | upstream | 35704 | 49647933 ~ 49654537 (-) | False | zgc:110269 |
| XM_021612758.2 | mRNA | upstream | 35704 | 49647933 ~ 49655158 (-) | True | zgc:110269 |
| TU814229 | other | downstream | 812577 | 48788521 ~ 48788962 (-) | True | G716488 |
| TU814220 | other | downstream | 819024 | 48782121 ~ 48782515 (-) | True | G716480 |
| TU814203 | other | downstream | 840376 | 48759912 ~ 48761163 (-) | True | G716463 |
| TU813956 | other | downstream | 985016 | 48542291 ~ 48616523 (-) | True | dlg1l |
| TU813564 | other | downstream | 1311958 | 48288942 ~ 48289581 (-) | True | G715865 |
| TU816366 | other | upstream | 173445 | 49785674 ~ 49837696 (-) | True | G718489 |
| TU816422 | other | upstream | 254401 | 49866630 ~ 49889252 (-) | False | LOC110530011 |
| TU817090 | other | upstream | 1324699 | 50936928 ~ 50939471 (-) | True | G719151 |
| TU817704 | other | upstream | 1640126 | 51252355 ~ 51259019 (-) | True | LOC110530043 |
| TU819491 | other | upstream | 3148810 | 52761039 ~ 52761451 (-) | True | G721275 |
