RNA id: XM_021612799.2


Basic Information

Item Value
RNA id XM_021612799.2
length 1402
RNA type mRNA
GC content 0.47
exon number 9
gene id hsd17b7
representative True

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 50690347 ~ 50710421 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

CGACAGTGATGTGTCGTCATCCAATCACACCATGTAGCCGTGTCTGCATAGGCTATCGTTGTGTTCATAACATCGGACCAGAGTGTTCTACATCGATAGTATTATTTTCTGTTATCTTCTTAACTTTCACCAGTTTCCTACATTTGAAGAAGAGCCATCATGGAGAAAGTGATTTTAGTGACCGGTGCGAACAGTGGCATCGGCCTAGCCCTGTGTGAGCGGCTGCTCTATGAGGACAGTCAGCTGCAGCTGTGTCTGGCCTGCAGGAACATGCAGAGGGCTGAGGCGGCCCGCTCCGCTCTGCTGACCTCTCACCCCGACGCCCAAATAGACCTGCTGCACCTGGATGTAGGCTCTGTCCGCTCGGTTCTCCACGCCGCCCACAAGGTCAAGGCTAGGTACAACAGACTGGACTACCTATACCTTAATGCCGGGATCATGCCAAATCCACAGATTGACATCAAAGCCTTTTTCAAGGGCCTATTTTCTAGCAACGTCGTCAAAATGTTTGCCACAGCAGAGGGCCTCCTGACCCAGCAGGACCATGTCAACAAAGATGGACTACAGGAAGTGTTCGCCACAAACCTGTTTGGACACTTTGTGCTGGTCAGGGAGCTAGACTCTATCCTTTGCCAGGCTGGTCAGACCTCCCGGGTAGTGTGGACTTCATCCAGCAATGCCAGACGCTCGGCCTTCAGTCTAGACGATGTCCAGCACAGACTGGGGACCGAGCCCTACGCGTCCTCCAAGTATGCCTCCGACCTCATCAGCCTTGCCCtcaacagacacaaaaacagCCAGGGGCTGTACTCATCAGTGATTTGTCCAGGGCTGGTGATGACCAATCTTACCTATGGCATCCTCCCCTCCTTCTTCTGGACCCTCATCATGCCCATCATGTATCTTATACGAATCTTCACCAACACGTTCACACTGACACCGCACAATGGAGCTGGAGCATTGCACTCGCTGTTTCTGAAAAAAACTGAGTCCCTGGATCCGAAGGCAAAGTATCACAGTTTGACGTCAGGCATGGGGAGCAACTACACGCAGCCTCGACAAaTGGACATCGATGACGACATGTCAGAGGCCCTGTATGTGAAACTGCTGGAAATGGAAAAATCTGCTCGTAAGAGATTGAAAGAAGAGGATGACAATAAACAAGCCTACAAAAAGTACCTCAACCAGACAGAGTAGTATTTTGTATGGCTGTTCTCCTTTACTAACTAGTTTAGGCCTAATCACACAACTTTTATTCTATAGCATATAATATataattttgttacgttacagccttattctaaaatgtattaaatacatttttttaaatctcagcaatctacaccacaatgacaaagtgaaaaaatattttttgaattgtttgcaaatgtattaaacaata

Function

GO: NA

KEGG:

id description
K13373 HSD17B7; 17beta-estradiol 17-dehydrogenase / 3beta-hydroxysteroid 3-dehydrogenase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU816897 lncRNA downstream 118607 50571308 ~ 50571740 (-) True G718986
TU816849 lncRNA downstream 164633 50525475 ~ 50525714 (-) True G718945
TU816731 lncRNA downstream 237514 50357313 ~ 50452833 (-) False G718834
TU816971 lncRNA upstream 4161 50714582 ~ 50714934 (-) True G719056
TU816969 lncRNA upstream 5738 50716159 ~ 50718605 (-) True LOC110530033
TU816983 lncRNA upstream 23656 50734077 ~ 50734533 (-) True G719068
TU816994 lncRNA upstream 25838 50736259 ~ 50736862 (-) False G719069
TU816988 lncRNA upstream 26667 50737088 ~ 50738316 (-) False G719069
XM_036985588.1 mRNA downstream 5089 50678172 ~ 50685258 (-) True LOC110530028
XM_036985587.1 mRNA downstream 5091 50678172 ~ 50685256 (-) False LOC110530028
XM_036985589.1 mRNA downstream 5136 50678172 ~ 50685211 (-) False LOC110530028
XM_021612797.2 mRNA downstream 16030 50665631 ~ 50674317 (-) False LOC110530027
XM_021612800.2 mRNA upstream 5707 50716128 ~ 50729928 (-) False LOC110530033
XM_036985591.1 mRNA upstream 5707 50716128 ~ 50729929 (-) False LOC110530033
XM_036985592.1 mRNA upstream 5707 50716128 ~ 50729929 (-) False LOC110530033
XM_036985593.1 mRNA upstream 5707 50716128 ~ 50729929 (-) False LOC110530033
XM_036985594.1 mRNA upstream 5707 50716128 ~ 50729930 (-) False LOC110530033
TU816422 other downstream 801095 49866630 ~ 49889252 (-) False LOC110530011
TU816366 other downstream 852651 49785674 ~ 49837696 (-) True G718489
TU814229 other downstream 1901385 48788521 ~ 48788962 (-) True G716488
TU814220 other downstream 1907832 48782121 ~ 48782515 (-) True G716480
TU814203 other downstream 1929184 48759912 ~ 48761163 (-) True G716463
TU817090 other upstream 226507 50936928 ~ 50939471 (-) True G719151
TU817704 other upstream 541934 51252355 ~ 51259019 (-) True LOC110530043
TU819491 other upstream 2050618 52761039 ~ 52761451 (-) True G721275
TU820029 other upstream 2752761 53463182 ~ 53463764 (-) False LOC110529122
TU820769 other upstream 2787727 53498148 ~ 53499730 (-) True G722459

Expression Profile