Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_036985601.1 |
| length | 1265 |
| RNA type | mRNA |
| GC content | 0.54 |
| exon number | 10 |
| gene id | LOC110530045 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 51316294 ~ 51323600 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0006406 | mRNA export from nucleus | biological_process |
| GO:0016607 | nuclear speck | cellular_component |
| GO:0003729 | mRNA binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU817756 | lncRNA | downstream | 4455 | 51313308 ~ 51313537 (-) | True | G719762 |
| TU817748 | lncRNA | downstream | 5318 | 51311889 ~ 51312674 (-) | False | G719761 |
| TU817752 | lncRNA | downstream | 5390 | 51311889 ~ 51312602 (-) | True | G719761 |
| TU817686 | lncRNA | downstream | 89321 | 51228401 ~ 51228671 (-) | True | G719702 |
| TU817685 | lncRNA | downstream | 89690 | 51228088 ~ 51228302 (-) | True | G719701 |
| TU817763 | lncRNA | upstream | 4606 | 51328206 ~ 51328432 (-) | True | G719767 |
| TU817790 | lncRNA | upstream | 55619 | 51379219 ~ 51380062 (-) | True | LOC110530046 |
| TU817833 | lncRNA | upstream | 115354 | 51438954 ~ 51439395 (-) | True | G719835 |
| TU817839 | lncRNA | upstream | 121620 | 51445220 ~ 51445520 (-) | True | G719841 |
| TU817840 | lncRNA | upstream | 123139 | 51446739 ~ 51446984 (-) | True | G719842 |
| XM_021612815.2 | mRNA | downstream | 58931 | 51254165 ~ 51259061 (-) | False | LOC110530043 |
| XM_021612817.2 | mRNA | downstream | 58932 | 51252355 ~ 51259060 (-) | False | LOC110530043 |
| XM_021612816.2 | mRNA | downstream | 58936 | 51252355 ~ 51259056 (-) | False | LOC110530043 |
| XM_021612813.2 | mRNA | downstream | 128380 | 51127614 ~ 51189612 (-) | False | LOC110530042 |
| XR_005052895.1 | mRNA | downstream | 250343 | 51066307 ~ 51067649 (-) | False | LOC110530040 |
| XM_021612824.2 | mRNA | upstream | 54304 | 51377904 ~ 51380863 (-) | False | LOC110530046 |
| XM_021612828.2 | mRNA | upstream | 172480 | 51496080 ~ 51516909 (-) | True | mfsd8l2 |
| XM_021612831.2 | mRNA | upstream | 201667 | 51525267 ~ 51546934 (-) | True | LOC110530051 |
| XM_021612832.2 | mRNA | upstream | 237200 | 51560800 ~ 51582355 (-) | True | LOC110530052 |
| XM_021612833.2 | mRNA | upstream | 259925 | 51583525 ~ 51591883 (-) | False | LOC110530053 |
| TU817704 | other | downstream | 58973 | 51252355 ~ 51259019 (-) | True | LOC110530043 |
| TU817090 | other | downstream | 378521 | 50936928 ~ 50939471 (-) | True | G719151 |
| TU816422 | other | downstream | 1428740 | 49866630 ~ 49889252 (-) | False | LOC110530011 |
| TU816366 | other | downstream | 1480296 | 49785674 ~ 49837696 (-) | True | G718489 |
| TU814229 | other | downstream | 2529030 | 48788521 ~ 48788962 (-) | True | G716488 |
| TU819491 | other | upstream | 1437439 | 52761039 ~ 52761451 (-) | True | G721275 |
| TU820029 | other | upstream | 2139582 | 53463182 ~ 53463764 (-) | False | LOC110529122 |
| TU820769 | other | upstream | 2174548 | 53498148 ~ 53499730 (-) | True | G722459 |
| TU820950 | other | upstream | 2479843 | 53803443 ~ 53856065 (-) | True | G722602 |
| TU821019 | other | upstream | 2602628 | 53926228 ~ 53927959 (-) | True | G722670 |
