RNA id: trnav-uac-5



Basic Information


Item Value
RNA id trnav-uac-5
length 73
RNA type mRNA
GC content 0.49
exon number 1
gene id trnav-uac-5
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 52532541 ~ 52532613 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gtttccgtagtgtagtggttatcaagtTCGCCTTACATGCGAAAGGTCCCcagttcgagaccgggcggaaaca

Function


GO: NA

KEGG: NA

JBrowse2


Loading

Neighbor


RNA id RNA type direction distance location representative gene id
TU819437 lncRNA downstream 42138 52483522 ~ 52490403 (-) True G721235
TU819408 lncRNA downstream 72882 52448814 ~ 52459659 (-) True G721207
TU819406 lncRNA downstream 75683 52448383 ~ 52456858 (-) False G721207
TU819407 lncRNA downstream 75683 52448383 ~ 52456858 (-) False G721207
TU819401 lncRNA downstream 123313 52408868 ~ 52409228 (-) True G721203
TU819453 lncRNA upstream 596 52533209 ~ 52668446 (-) True G721245
TU819457 lncRNA upstream 7467 52540080 ~ 52545734 (-) True G721248
TU819443 lncRNA upstream 56606 52589219 ~ 52656589 (-) True G721238
TU819473 lncRNA upstream 186673 52719286 ~ 52726784 (-) False G721260
TU819474 lncRNA upstream 188174 52720787 ~ 52726784 (-) False G721260
trnav-cac-25 mRNA downstream 113 52532356 ~ 52532428 (-) True trnav-cac-25
trnav-aac-47 mRNA downstream 1083 52531386 ~ 52531458 (-) True trnav-aac-47
trnav-aac-46 mRNA downstream 1285 52531184 ~ 52531256 (-) True trnav-aac-46
trnav-cac-24 mRNA downstream 1470 52530999 ~ 52531071 (-) True trnav-cac-24
trnav-aac-45 mRNA downstream 2442 52530027 ~ 52530099 (-) True trnav-aac-45
trnav-uac-6 mRNA upstream 130 52532743 ~ 52532815 (-) True trnav-uac-6
trnav-aac-48 mRNA upstream 1562 52534175 ~ 52534247 (-) True trnav-aac-48
trnav-aac-49 mRNA upstream 3406 52536019 ~ 52536091 (-) True trnav-aac-49
trnav-aac-50 mRNA upstream 5561 52538174 ~ 52538246 (-) True trnav-aac-50
trnav-aac-51 mRNA upstream 5760 52538373 ~ 52538445 (-) True trnav-aac-51
TU817704 other downstream 1273522 51252355 ~ 51259019 (-) True LOC110530043
TU817090 other downstream 1593070 50936928 ~ 50939471 (-) True G719151
TU816422 other downstream 2643289 49866630 ~ 49889252 (-) False LOC110530011
TU816366 other downstream 2694845 49785674 ~ 49837696 (-) True G718489
TU814229 other downstream 3743579 48788521 ~ 48788962 (-) True G716488
TU819491 other upstream 228426 52761039 ~ 52761451 (-) True G721275
TU820029 other upstream 930569 53463182 ~ 53463764 (-) False LOC110529122
TU820769 other upstream 965535 53498148 ~ 53499730 (-) True G722459
TU820950 other upstream 1270830 53803443 ~ 53856065 (-) True G722602
TU821019 other upstream 1393615 53926228 ~ 53927959 (-) True G722670