RNA id: trnav-aac-129


Basic Information

Item Value
RNA id trnav-aac-129
length 73
RNA type mRNA
GC content 0.56
exon number 1
gene id trnav-aac-129
representative True

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 52657757 ~ 52657829 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

gtttccgtagtgtagtggttatcatgttcgcctaacacgcgaaaggtccccggttcgagaccgggcggcaaca

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU819443 lncRNA downstream 1168 52589219 ~ 52656589 (-) True G721238
TU819447 lncRNA downstream 57621 52503689 ~ 52600136 (-) True trnav-cac-22
TU819440 lncRNA downstream 65801 52484057 ~ 52591956 (-) True G721236
TU819451 lncRNA downstream 67931 52528403 ~ 52589826 (-) True G721243
TU819457 lncRNA downstream 112023 52540080 ~ 52545734 (-) True G721248
TU819473 lncRNA upstream 61457 52719286 ~ 52726784 (-) False G721260
TU819474 lncRNA upstream 62958 52720787 ~ 52726784 (-) False G721260
TU819472 lncRNA upstream 67119 52724948 ~ 52726784 (-) True G721260
TU819504 lncRNA upstream 120549 52778378 ~ 52778596 (-) True G721288
TU819505 lncRNA upstream 121207 52779036 ~ 52779473 (-) True G721289
trnav-aac-128 mRNA downstream 1234 52656451 ~ 52656523 (-) True trnav-aac-128
trnav-aac-127 mRNA downstream 2407 52655278 ~ 52655350 (-) True trnav-aac-127
trnav-aac-126 mRNA downstream 3574 52654111 ~ 52654183 (-) True trnav-aac-126
trnav-aac-125 mRNA downstream 4817 52652868 ~ 52652940 (-) True trnav-aac-125
trnav-cac-39 mRNA downstream 5019 52652666 ~ 52652738 (-) True trnav-cac-39
trnav-cac-40 mRNA upstream 1234 52659063 ~ 52659135 (-) True trnav-cac-40
trnav-aac-130 mRNA upstream 1436 52659265 ~ 52659337 (-) True trnav-aac-130
trnav-cac-41 mRNA upstream 2742 52660571 ~ 52660643 (-) True trnav-cac-41
trnav-aac-131 mRNA upstream 2944 52660773 ~ 52660845 (-) True trnav-aac-131
trnav-cac-42 mRNA upstream 4251 52662080 ~ 52662152 (-) True trnav-cac-42
TU817704 other downstream 1398738 51252355 ~ 51259019 (-) True LOC110530043
TU817090 other downstream 1718286 50936928 ~ 50939471 (-) True G719151
TU816422 other downstream 2768505 49866630 ~ 49889252 (-) False LOC110530011
TU816366 other downstream 2820061 49785674 ~ 49837696 (-) True G718489
TU814229 other downstream 3868795 48788521 ~ 48788962 (-) True G716488
TU819491 other upstream 103210 52761039 ~ 52761451 (-) True G721275
TU820029 other upstream 805353 53463182 ~ 53463764 (-) False LOC110529122
TU820769 other upstream 840319 53498148 ~ 53499730 (-) True G722459
TU820950 other upstream 1145614 53803443 ~ 53856065 (-) True G722602
TU821019 other upstream 1268399 53926228 ~ 53927959 (-) True G722670