RNA id: trnav-aac-130



Basic Information


Item Value
RNA id trnav-aac-130
length 73
RNA type mRNA
GC content 0.53
exon number 1
gene id trnav-aac-130
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 52659265 ~ 52659337 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gtttctgtagtgtagtggttatcacgttcgcctaacacgcgaaaggtccccggtttgagaccgggcggaaaca

Function


GO: NA

KEGG: NA

JBrowse2


Loading

Neighbor


RNA id RNA type direction distance location representative gene id
TU819443 lncRNA downstream 2676 52589219 ~ 52656589 (-) True G721238
TU819447 lncRNA downstream 59129 52503689 ~ 52600136 (-) True trnav-cac-22
TU819440 lncRNA downstream 67309 52484057 ~ 52591956 (-) True G721236
TU819473 lncRNA upstream 59949 52719286 ~ 52726784 (-) False G721260
TU819474 lncRNA upstream 61450 52720787 ~ 52726784 (-) False G721260
TU819472 lncRNA upstream 65611 52724948 ~ 52726784 (-) True G721260
TU819504 lncRNA upstream 119041 52778378 ~ 52778596 (-) True G721288
TU819505 lncRNA upstream 119699 52779036 ~ 52779473 (-) True G721289
trnav-cac-40 mRNA downstream 130 52659063 ~ 52659135 (-) True trnav-cac-40
trnav-aac-129 mRNA downstream 1436 52657757 ~ 52657829 (-) True trnav-aac-129
trnav-aac-128 mRNA downstream 2742 52656451 ~ 52656523 (-) True trnav-aac-128
trnav-aac-127 mRNA downstream 3915 52655278 ~ 52655350 (-) True trnav-aac-127
trnav-aac-126 mRNA downstream 5082 52654111 ~ 52654183 (-) True trnav-aac-126
trnav-cac-41 mRNA upstream 1234 52660571 ~ 52660643 (-) True trnav-cac-41
trnav-aac-131 mRNA upstream 1436 52660773 ~ 52660845 (-) True trnav-aac-131
trnav-cac-42 mRNA upstream 2743 52662080 ~ 52662152 (-) True trnav-cac-42
trnav-cac-43 mRNA upstream 2945 52662282 ~ 52662354 (-) True trnav-cac-43
trnav-cac-44 mRNA upstream 5309 52664646 ~ 52664718 (-) True trnav-cac-44
TU817704 other downstream 1400246 51252355 ~ 51259019 (-) True LOC110530043
TU817090 other downstream 1719794 50936928 ~ 50939471 (-) True G719151
TU816422 other downstream 2770013 49866630 ~ 49889252 (-) False LOC110530011
TU816366 other downstream 2821569 49785674 ~ 49837696 (-) True G718489
TU814229 other downstream 3870303 48788521 ~ 48788962 (-) True G716488
TU819491 other upstream 101702 52761039 ~ 52761451 (-) True G721275
TU820029 other upstream 803845 53463182 ~ 53463764 (-) False LOC110529122
TU820769 other upstream 838811 53498148 ~ 53499730 (-) True G722459
TU820950 other upstream 1144106 53803443 ~ 53856065 (-) True G722602
TU821019 other upstream 1266891 53926228 ~ 53927959 (-) True G722670