Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU820041 |
| length | 236 |
| lncRNA type | sense_over |
| GC content | 0.61 |
| exon number | 3 |
| gene id | LOC110529122 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 53462034 ~ 53478913 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
53,458,000
53,460,000
53,462,000
53,464,000
53,466,000
53,468,000
53,470,000
53,472,000
53,474,000
53,476,000
53,478,000
53,480,000
53,482,000
53,484,000
53,486,000
53,488,000
NC_048572.1
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU820028 | lncRNA | downstream | 948 | 53462423 ~ 53462852 (-) | False | LOC110529122 |
| TU820019 | lncRNA | downstream | 5774 | 53457822 ~ 53458026 (-) | True | G721782 |
| TU820002 | lncRNA | downstream | 19715 | 53443792 ~ 53444085 (-) | True | G721766 |
| TU819983 | lncRNA | downstream | 32848 | 53430703 ~ 53430952 (-) | True | G721747 |
| TU819940 | lncRNA | downstream | 76120 | 53387475 ~ 53387680 (-) | True | G721704 |
| TU820062 | lncRNA | upstream | 3410 | 53480893 ~ 53481125 (-) | True | G721825 |
| TU820770 | lncRNA | upstream | 18321 | 53495804 ~ 53497427 (-) | False | G722459 |
| TU820773 | lncRNA | upstream | 50113 | 53527596 ~ 53533919 (-) | True | LOC118965526 |
| TU820801 | lncRNA | upstream | 118073 | 53595556 ~ 53595773 (-) | True | G722488 |
| TU820815 | lncRNA | upstream | 158366 | 53635849 ~ 53709367 (-) | True | LOC110530114 |
| XM_036985657.1 | mRNA | downstream | 103555 | 53342603 ~ 53360245 (-) | True | nsun4 |
| XM_036985654.1 | mRNA | downstream | 205285 | 53255197 ~ 53258515 (-) | True | LOC110530106 |
| XM_021612923.2 | mRNA | downstream | 205970 | 53255197 ~ 53257830 (-) | False | LOC110530106 |
| XM_036985655.1 | mRNA | downstream | 206211 | 53255197 ~ 53257589 (-) | False | LOC110530106 |
| XM_021612915.2 | mRNA | downstream | 396014 | 53059646 ~ 53067786 (-) | True | dipk1aa |
| XM_021612937.2 | mRNA | upstream | 22973 | 53500456 ~ 53569137 (-) | False | LOC110530111 |
| XM_021612934.2 | mRNA | upstream | 22973 | 53500456 ~ 53569139 (-) | False | LOC110530111 |
| XM_021612935.2 | mRNA | upstream | 22973 | 53500456 ~ 53585618 (-) | False | LOC110530111 |
| XM_021612938.2 | mRNA | upstream | 22973 | 53500456 ~ 53585618 (-) | False | LOC110530111 |
| XM_021612931.2 | mRNA | upstream | 22973 | 53500456 ~ 53585620 (-) | False | LOC110530111 |
| TU820029 | other | downstream | 36 | 53463182 ~ 53463764 (-) | False | LOC110529122 |
| TU819491 | other | downstream | 702349 | 52761039 ~ 52761451 (-) | True | G721275 |
| TU817704 | other | downstream | 2204781 | 51252355 ~ 51259019 (-) | True | LOC110530043 |
| TU817090 | other | downstream | 2524329 | 50936928 ~ 50939471 (-) | True | G719151 |
| TU816422 | other | downstream | 3574548 | 49866630 ~ 49889252 (-) | False | LOC110530011 |
| TU820769 | other | upstream | 20665 | 53498148 ~ 53499730 (-) | True | G722459 |
| TU820950 | other | upstream | 325960 | 53803443 ~ 53856065 (-) | True | G722602 |
| TU821019 | other | upstream | 448745 | 53926228 ~ 53927959 (-) | True | G722670 |
| TU821119 | other | upstream | 646896 | 54124379 ~ 54139341 (-) | True | G722761 |
| TU821220 | other | upstream | 773631 | 54251114 ~ 54251546 (-) | True | G722854 |
