Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_036985663.1 |
| length | 3958 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 5 |
| gene id | LOC110530114 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 53635788 ~ 53709367 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
53,622,000
53,624,000
53,626,000
53,628,000
53,630,000
53,632,000
53,634,000
53,636,000
53,638,000
53,640,000
53,642,000
53,644,000
53,646,000
53,648,000
53,650,000
53,652,000
NC_048572.1
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU820801 | lncRNA | downstream | 40015 | 53595556 ~ 53595773 (-) | True | G722488 |
| TU820773 | lncRNA | downstream | 101869 | 53527596 ~ 53533919 (-) | True | LOC118965526 |
| TU820770 | lncRNA | downstream | 138361 | 53495804 ~ 53497427 (-) | False | G722459 |
| TU820062 | lncRNA | downstream | 154663 | 53480893 ~ 53481125 (-) | True | G721825 |
| TU820041 | lncRNA | downstream | 158305 | 53463800 ~ 53477483 (-) | True | LOC110529122 |
| TU820840 | lncRNA | upstream | 29563 | 53677925 ~ 53679995 (-) | True | G722523 |
| TU820885 | lncRNA | upstream | 176662 | 53825024 ~ 53828481 (-) | True | LOC110530934 |
| TU820960 | lncRNA | upstream | 180317 | 53828679 ~ 53829059 (-) | True | G722612 |
| TU821007 | lncRNA | upstream | 256786 | 53905148 ~ 53905462 (-) | True | G722659 |
| TU821035 | lncRNA | upstream | 296232 | 53944594 ~ 53944946 (-) | True | G722686 |
| XM_036985661.1 | mRNA | downstream | 196 | 53599635 ~ 53635592 (-) | True | LOC110530113 |
| XM_036985660.1 | mRNA | downstream | 210 | 53599635 ~ 53635578 (-) | False | LOC110530113 |
| XM_036985659.1 | mRNA | downstream | 212 | 53599635 ~ 53635576 (-) | False | LOC110530113 |
| XM_036985662.1 | mRNA | downstream | 2171 | 53599635 ~ 53633617 (-) | False | LOC110530113 |
| XM_021612932.2 | mRNA | downstream | 50167 | 53500456 ~ 53585621 (-) | False | LOC110530111 |
| XM_036985669.1 | mRNA | upstream | 33246 | 53681608 ~ 53706662 (-) | False | LOC110530116 |
| XM_021612944.2 | mRNA | upstream | 33246 | 53681608 ~ 53712234 (-) | True | LOC110530116 |
| trnak-cuu-2 | mRNA | upstream | 48266 | 53696628 ~ 53696700 (-) | True | trnak-cuu-2 |
| XM_021612945.2 | mRNA | upstream | 73810 | 53722172 ~ 53728671 (-) | True | plvapa |
| XM_021612947.2 | mRNA | upstream | 158301 | 53806663 ~ 53812189 (-) | False | ocel1 |
| TU820769 | other | downstream | 136058 | 53498148 ~ 53499730 (-) | True | G722459 |
| TU820029 | other | downstream | 172024 | 53463182 ~ 53463764 (-) | False | LOC110529122 |
| TU819491 | other | downstream | 874337 | 52761039 ~ 52761451 (-) | True | G721275 |
| TU817704 | other | downstream | 2376769 | 51252355 ~ 51259019 (-) | True | LOC110530043 |
| TU817090 | other | downstream | 2696317 | 50936928 ~ 50939471 (-) | True | G719151 |
| TU820950 | other | upstream | 155081 | 53803443 ~ 53856065 (-) | True | G722602 |
| TU821019 | other | upstream | 277866 | 53926228 ~ 53927959 (-) | True | G722670 |
| TU821119 | other | upstream | 476017 | 54124379 ~ 54139341 (-) | True | G722761 |
| TU821220 | other | upstream | 602752 | 54251114 ~ 54251546 (-) | True | G722854 |
| TU821231 | other | upstream | 633323 | 54281685 ~ 54281978 (-) | True | G722864 |
