Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021612945.2 |
| length | 3419 |
| RNA type | mRNA |
| GC content | 0.48 |
| exon number | 6 |
| gene id | plvapa |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 53722172 ~ 53728671 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU820815 | lncRNA | downstream | 12805 | 53635849 ~ 53709367 (-) | True | LOC110530114 |
| TU820840 | lncRNA | downstream | 42177 | 53677925 ~ 53679995 (-) | True | G722523 |
| TU820801 | lncRNA | downstream | 126399 | 53595556 ~ 53595773 (-) | True | G722488 |
| TU820773 | lncRNA | downstream | 188253 | 53527596 ~ 53533919 (-) | True | LOC118965526 |
| TU820770 | lncRNA | downstream | 224745 | 53495804 ~ 53497427 (-) | False | G722459 |
| TU820885 | lncRNA | upstream | 96353 | 53825024 ~ 53828481 (-) | True | LOC110530934 |
| TU820960 | lncRNA | upstream | 100008 | 53828679 ~ 53829059 (-) | True | G722612 |
| TU821007 | lncRNA | upstream | 176477 | 53905148 ~ 53905462 (-) | True | G722659 |
| TU821035 | lncRNA | upstream | 215923 | 53944594 ~ 53944946 (-) | True | G722686 |
| TU821043 | lncRNA | upstream | 223524 | 53952195 ~ 53952400 (-) | True | G722694 |
| XM_021612944.2 | mRNA | downstream | 9938 | 53681608 ~ 53712234 (-) | True | LOC110530116 |
| XM_036985669.1 | mRNA | downstream | 15510 | 53681608 ~ 53706662 (-) | False | LOC110530116 |
| trnak-cuu-2 | mRNA | downstream | 25472 | 53696628 ~ 53696700 (-) | True | trnak-cuu-2 |
| XM_021612942.2 | mRNA | downstream | 62166 | 53635788 ~ 53660006 (-) | False | LOC110530114 |
| XM_036985663.1 | mRNA | downstream | 73810 | 53635788 ~ 53648362 (-) | False | LOC110530114 |
| XM_021612947.2 | mRNA | upstream | 77992 | 53806663 ~ 53812189 (-) | False | ocel1 |
| XR_002474481.2 | mRNA | upstream | 79396 | 53808067 ~ 53812192 (-) | True | ocel1 |
| XM_036985674.1 | mRNA | upstream | 90035 | 53818706 ~ 53880779 (-) | False | LOC110530934 |
| XM_036985675.1 | mRNA | upstream | 90035 | 53818706 ~ 53880779 (-) | False | LOC110530934 |
| XM_036985672.1 | mRNA | upstream | 90035 | 53818706 ~ 53880781 (-) | False | LOC110530934 |
| TU820769 | other | downstream | 222442 | 53498148 ~ 53499730 (-) | True | G722459 |
| TU820029 | other | downstream | 258408 | 53463182 ~ 53463764 (-) | False | LOC110529122 |
| TU819491 | other | downstream | 960721 | 52761039 ~ 52761451 (-) | True | G721275 |
| TU817704 | other | downstream | 2463153 | 51252355 ~ 51259019 (-) | True | LOC110530043 |
| TU817090 | other | downstream | 2782701 | 50936928 ~ 50939471 (-) | True | G719151 |
| TU820950 | other | upstream | 74772 | 53803443 ~ 53856065 (-) | True | G722602 |
| TU821019 | other | upstream | 197557 | 53926228 ~ 53927959 (-) | True | G722670 |
| TU821119 | other | upstream | 395708 | 54124379 ~ 54139341 (-) | True | G722761 |
| TU821220 | other | upstream | 522443 | 54251114 ~ 54251546 (-) | True | G722854 |
| TU821231 | other | upstream | 553014 | 54281685 ~ 54281978 (-) | True | G722864 |
