Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU820885 |
| length | 729 |
| lncRNA type | sense_over |
| GC content | 0.44 |
| exon number | 3 |
| gene id | LOC110530934 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 53818706 ~ 53880785 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU820815 | lncRNA | downstream | 115657 | 53635849 ~ 53709367 (-) | True | LOC110530114 |
| TU820840 | lncRNA | downstream | 145029 | 53677925 ~ 53679995 (-) | True | G722523 |
| TU820801 | lncRNA | downstream | 229251 | 53595556 ~ 53595773 (-) | True | G722488 |
| TU820773 | lncRNA | downstream | 291105 | 53527596 ~ 53533919 (-) | True | LOC118965526 |
| TU820770 | lncRNA | downstream | 327597 | 53495804 ~ 53497427 (-) | False | G722459 |
| TU820960 | lncRNA | upstream | 198 | 53828679 ~ 53829059 (-) | True | G722612 |
| TU821007 | lncRNA | upstream | 76667 | 53905148 ~ 53905462 (-) | True | G722659 |
| TU821035 | lncRNA | upstream | 116113 | 53944594 ~ 53944946 (-) | True | G722686 |
| TU821043 | lncRNA | upstream | 123714 | 53952195 ~ 53952400 (-) | True | G722694 |
| TU821045 | lncRNA | upstream | 125716 | 53954197 ~ 53954429 (-) | True | G722696 |
| XR_002474481.2 | mRNA | downstream | 12832 | 53808067 ~ 53812192 (-) | True | ocel1 |
| XM_021612947.2 | mRNA | downstream | 12835 | 53806663 ~ 53812189 (-) | False | ocel1 |
| XM_021612945.2 | mRNA | downstream | 96353 | 53722172 ~ 53728671 (-) | True | plvapa |
| XM_021612944.2 | mRNA | downstream | 112790 | 53681608 ~ 53712234 (-) | True | LOC110530116 |
| XM_036985669.1 | mRNA | downstream | 118362 | 53681608 ~ 53706662 (-) | False | LOC110530116 |
| XM_021614230.2 | mRNA | upstream | 86339 | 53914820 ~ 53917617 (-) | True | insl3 |
| XM_036985678.1 | mRNA | upstream | 137516 | 53965997 ~ 53995304 (-) | False | LOC110530121 |
| XM_036985679.1 | mRNA | upstream | 137516 | 53965997 ~ 53995304 (-) | False | LOC110530121 |
| XM_036985680.1 | mRNA | upstream | 152928 | 53981409 ~ 53995304 (-) | True | LOC110530121 |
| XM_021612952.2 | mRNA | upstream | 172648 | 54001129 ~ 54003188 (-) | True | LOC110530123 |
| TU820769 | other | downstream | 325294 | 53498148 ~ 53499730 (-) | True | G722459 |
| TU820029 | other | downstream | 361260 | 53463182 ~ 53463764 (-) | False | LOC110529122 |
| TU819491 | other | downstream | 1063573 | 52761039 ~ 52761451 (-) | True | G721275 |
| TU817704 | other | downstream | 2566005 | 51252355 ~ 51259019 (-) | True | LOC110530043 |
| TU817090 | other | downstream | 2885553 | 50936928 ~ 50939471 (-) | True | G719151 |
| TU821019 | other | upstream | 97747 | 53926228 ~ 53927959 (-) | True | G722670 |
| TU821119 | other | upstream | 295898 | 54124379 ~ 54139341 (-) | True | G722761 |
| TU821220 | other | upstream | 422633 | 54251114 ~ 54251546 (-) | True | G722854 |
| TU821231 | other | upstream | 453204 | 54281685 ~ 54281978 (-) | True | G722864 |
| TU822417 | other | upstream | 1548800 | 55377281 ~ 55377776 (-) | True | G723955 |
