Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021612952.2 |
| length | 578 |
| RNA type | mRNA |
| GC content | 0.53 |
| exon number | 4 |
| gene id | LOC110530123 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 54001129 ~ 54003188 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0006412 | translation | biological_process |
| GO:0015935 | small ribosomal subunit | cellular_component |
| GO:0003723 | RNA binding | molecular_function |
| GO:0003735 | structural constituent of ribosome | molecular_function |
| id | description |
|---|---|
| K02958 | RP-S15e, RPS15; small subunit ribosomal protein S15e |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU821055 | lncRNA | downstream | 35722 | 53965176 ~ 53965407 (-) | True | G722699 |
| TU821045 | lncRNA | downstream | 46700 | 53954197 ~ 53954429 (-) | True | G722696 |
| TU821043 | lncRNA | downstream | 48729 | 53952195 ~ 53952400 (-) | True | G722694 |
| TU821035 | lncRNA | downstream | 56183 | 53944594 ~ 53944946 (-) | True | G722686 |
| TU821007 | lncRNA | downstream | 95667 | 53905148 ~ 53905462 (-) | True | G722659 |
| TU821086 | lncRNA | upstream | 30103 | 54033291 ~ 54034722 (-) | True | G722728 |
| TU821166 | lncRNA | upstream | 177254 | 54180442 ~ 54185532 (-) | True | G722805 |
| TU821173 | lncRNA | upstream | 184881 | 54188069 ~ 54189214 (-) | True | G722812 |
| TU821176 | lncRNA | upstream | 186204 | 54189392 ~ 54243058 (-) | True | G722814 |
| TU821132 | lncRNA | upstream | 201500 | 54204688 ~ 54207815 (-) | True | G722773 |
| XM_036985678.1 | mRNA | downstream | 5825 | 53965997 ~ 53995304 (-) | False | LOC110530121 |
| XM_036985679.1 | mRNA | downstream | 5825 | 53965997 ~ 53995304 (-) | False | LOC110530121 |
| XM_036985680.1 | mRNA | downstream | 5825 | 53981409 ~ 53995304 (-) | True | LOC110530121 |
| XM_021614230.2 | mRNA | downstream | 83512 | 53914820 ~ 53917617 (-) | True | insl3 |
| XM_036985677.1 | mRNA | downstream | 120344 | 53825024 ~ 53880785 (-) | False | LOC110530934 |
| XM_036985681.1 | mRNA | upstream | 5246 | 54008434 ~ 54014434 (-) | True | cnn2 |
| XM_021612954.2 | mRNA | upstream | 21548 | 54024736 ~ 54039571 (-) | False | crsp7 |
| XM_021612953.2 | mRNA | upstream | 21548 | 54024736 ~ 54039572 (-) | True | crsp7 |
| XM_021612959.2 | mRNA | upstream | 54934 | 54058122 ~ 54105410 (-) | True | LOC110530125 |
| XM_021612960.2 | mRNA | upstream | 123880 | 54127068 ~ 54131739 (-) | True | LOC110530126 |
| TU821019 | other | downstream | 73170 | 53926228 ~ 53927959 (-) | True | G722670 |
| TU820950 | other | downstream | 145064 | 53803443 ~ 53856065 (-) | True | G722602 |
| TU820769 | other | downstream | 501399 | 53498148 ~ 53499730 (-) | True | G722459 |
| TU820029 | other | downstream | 537365 | 53463182 ~ 53463764 (-) | False | LOC110529122 |
| TU819491 | other | downstream | 1239678 | 52761039 ~ 52761451 (-) | True | G721275 |
| TU821119 | other | upstream | 121191 | 54124379 ~ 54139341 (-) | True | G722761 |
| TU821220 | other | upstream | 247926 | 54251114 ~ 54251546 (-) | True | G722854 |
| TU821231 | other | upstream | 278497 | 54281685 ~ 54281978 (-) | True | G722864 |
| TU822417 | other | upstream | 1374093 | 55377281 ~ 55377776 (-) | True | G723955 |
| TU822429 | other | upstream | 1393436 | 55396624 ~ 55396885 (-) | True | G723966 |
