Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021612975.2 |
| length | 3342 |
| RNA type | mRNA |
| GC content | 0.43 |
| exon number | 1 |
| gene id | LOC110530134 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 54374233 ~ 54377574 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0043565 | sequence-specific DNA binding | molecular_function |
| GO:0003700 | DNA-binding transcription factor activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU821281 | lncRNA | downstream | 42458 | 54330765 ~ 54331775 (-) | True | G722906 |
| TU821229 | lncRNA | downstream | 97194 | 54276769 ~ 54277039 (-) | True | G722862 |
| TU821230 | lncRNA | downstream | 101178 | 54272776 ~ 54273055 (-) | True | G722863 |
| TU821227 | lncRNA | downstream | 110374 | 54263739 ~ 54263859 (-) | True | G722860 |
| TU821218 | lncRNA | downstream | 119829 | 54254162 ~ 54254404 (-) | True | G722852 |
| TU821332 | lncRNA | upstream | 27041 | 54404615 ~ 54405913 (-) | True | G722949 |
| TU821364 | lncRNA | upstream | 91331 | 54468905 ~ 54469431 (-) | True | G722978 |
| TU821376 | lncRNA | upstream | 132589 | 54510163 ~ 54510508 (-) | True | G722990 |
| TU821379 | lncRNA | upstream | 135771 | 54513345 ~ 54514044 (-) | True | G722993 |
| TU821383 | lncRNA | upstream | 140244 | 54517818 ~ 54518410 (-) | True | G722997 |
| XM_021612960.2 | mRNA | downstream | 242494 | 54127068 ~ 54131739 (-) | True | LOC110530126 |
| XM_021612959.2 | mRNA | downstream | 268823 | 54058122 ~ 54105410 (-) | True | LOC110530125 |
| XM_021612953.2 | mRNA | downstream | 334661 | 54024736 ~ 54039572 (-) | True | crsp7 |
| XM_021612954.2 | mRNA | downstream | 334662 | 54024736 ~ 54039571 (-) | False | crsp7 |
| XM_036985681.1 | mRNA | downstream | 359799 | 54008434 ~ 54014434 (-) | True | cnn2 |
| XM_021612981.2 | mRNA | upstream | 65556 | 54443130 ~ 54445222 (-) | True | LOC110530139 |
| XM_021612982.2 | mRNA | upstream | 68645 | 54446219 ~ 54465716 (-) | True | LOC110530140 |
| XM_036985695.1 | mRNA | upstream | 100351 | 54477925 ~ 54485433 (-) | False | LOC110530141 |
| XM_021612983.2 | mRNA | upstream | 100351 | 54477925 ~ 54485771 (-) | False | LOC110530141 |
| XM_021612984.2 | mRNA | upstream | 100351 | 54477925 ~ 54485773 (-) | True | LOC110530141 |
| TU821231 | other | downstream | 92255 | 54281685 ~ 54281978 (-) | True | G722864 |
| TU821220 | other | downstream | 122687 | 54251114 ~ 54251546 (-) | True | G722854 |
| TU821119 | other | downstream | 234892 | 54124379 ~ 54139341 (-) | True | G722761 |
| TU821019 | other | downstream | 446274 | 53926228 ~ 53927959 (-) | True | G722670 |
| TU820950 | other | downstream | 518168 | 53803443 ~ 53856065 (-) | True | G722602 |
| TU822417 | other | upstream | 999707 | 55377281 ~ 55377776 (-) | True | G723955 |
| TU822429 | other | upstream | 1019050 | 55396624 ~ 55396885 (-) | True | G723966 |
| TU822777 | other | upstream | 1257964 | 55635538 ~ 55646014 (-) | True | G724287 |
| TU822909 | other | upstream | 1407943 | 55785517 ~ 55791485 (-) | True | G724400 |
| TU823541 | other | upstream | 1742629 | 56120203 ~ 56128288 (-) | False | G724943 |
