Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU836975 |
| length | 1008 |
| lncRNA type | sense_over |
| GC content | 0.37 |
| exon number | 2 |
| gene id | LOC110530392 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 66437381 ~ 66509379 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0086091 | regulation of heart rate by cardiac conduction | biological_process |
| GO:0071805 | potassium ion transmembrane transport | biological_process |
| GO:0042391 | regulation of membrane potential | biological_process |
| GO:0034765 | regulation of ion transmembrane transport | biological_process |
| GO:0005887 | integral component of plasma membrane | cellular_component |
| GO:0005249 | voltage-gated potassium channel activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU836928 | lncRNA | upstream | 97023 | 66409436 ~ 66411072 (+) | True | G737030 |
| TU836923 | lncRNA | upstream | 103274 | 66404321 ~ 66404821 (+) | True | G737025 |
| TU836570 | lncRNA | upstream | 162990 | 66343276 ~ 66345105 (+) | True | G736705 |
| TU836568 | lncRNA | upstream | 164963 | 66342122 ~ 66343132 (+) | True | G736704 |
| TU836563 | lncRNA | upstream | 167846 | 66338935 ~ 66340249 (+) | False | G736701 |
| TU837083 | lncRNA | downstream | 107884 | 66617085 ~ 66617353 (+) | True | G737161 |
| TU837084 | lncRNA | downstream | 108165 | 66617366 ~ 66617618 (+) | True | G737162 |
| TU837112 | lncRNA | downstream | 137138 | 66646339 ~ 66646563 (+) | True | G737189 |
| TU837115 | lncRNA | downstream | 139786 | 66648987 ~ 66649443 (+) | True | LOC118965632 |
| TU837127 | lncRNA | downstream | 150794 | 66659995 ~ 66660226 (+) | True | G737200 |
| XM_021613386.2 | mRNA | upstream | 247476 | 66223990 ~ 66260619 (+) | True | LOC110530387 |
| XM_021613387.2 | mRNA | upstream | 248288 | 66223982 ~ 66259807 (+) | False | LOC110530387 |
| XM_021613381.2 | mRNA | upstream | 289251 | 66210003 ~ 66218844 (+) | False | blvra |
| XM_021613382.2 | mRNA | upstream | 289251 | 66210009 ~ 66218844 (+) | True | blvra |
| XR_002474518.2 | mRNA | upstream | 366639 | 66139734 ~ 66141456 (+) | True | LOC110530386 |
| XM_021613403.2 | mRNA | downstream | 1224 | 66510425 ~ 66596240 (+) | False | LOC110530393 |
| XM_036986010.1 | mRNA | downstream | 1224 | 66510425 ~ 66596240 (+) | False | LOC110530393 |
| XM_036986011.1 | mRNA | downstream | 1224 | 66510425 ~ 66596240 (+) | False | LOC110530393 |
| XM_036986012.1 | mRNA | downstream | 1224 | 66510425 ~ 66596240 (+) | False | LOC110530393 |
| XM_036986013.1 | mRNA | downstream | 1224 | 66510425 ~ 66596240 (+) | False | LOC110530393 |
| TU836376 | other | upstream | 382757 | 66124208 ~ 66125338 (+) | True | si:ch211-106n13.3 |
| TU835372 | other | upstream | 840000 | 65666866 ~ 65668095 (+) | True | LOC110530364 |
| TU835317 | other | upstream | 906198 | 65599385 ~ 65601897 (+) | True | LOC110530360 |
| TU835205 | other | upstream | 1104996 | 65402223 ~ 65403099 (+) | True | G735512 |
| TU835130 | other | upstream | 1159598 | 65324935 ~ 65348497 (+) | True | si:ch211-207d6.2 |
| TU837120 | other | downstream | 145461 | 66654662 ~ 66655753 (+) | True | G737194 |
| TU837146 | other | downstream | 190485 | 66699686 ~ 66704085 (+) | True | kncn |
| TU837166 | other | downstream | 289372 | 66798573 ~ 66802080 (+) | False | G737234 |
| TU837167 | other | downstream | 289372 | 66798573 ~ 66801060 (+) | True | G737234 |
| TU837788 | other | downstream | 661266 | 67170467 ~ 67215629 (+) | True | G737783 |
