Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU838937 |
| length | 388 |
| RNA type | TUCP |
| GC content | 0.54 |
| exon number | 2 |
| gene id | LOC110530413 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 67904516 ~ 67924427 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0007186 | G protein-coupled receptor signaling pathway | biological_process |
| GO:0001505 | regulation of neurotransmitter levels | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0004969 | histamine receptor activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU838918 | lncRNA | upstream | 23263 | 67882863 ~ 67883114 (+) | True | G738798 |
| TU838913 | lncRNA | upstream | 32869 | 67873275 ~ 67873508 (+) | True | G738793 |
| TU838431 | lncRNA | upstream | 101609 | 67802322 ~ 67804768 (+) | True | G738367 |
| TU838407 | lncRNA | upstream | 130737 | 67773448 ~ 67775640 (+) | True | G738344 |
| TU838318 | lncRNA | upstream | 329271 | 67576771 ~ 67577106 (+) | True | G738262 |
| TU838959 | lncRNA | downstream | 1985 | 67924607 ~ 67983064 (+) | True | G738832 |
| TU838962 | lncRNA | downstream | 4888 | 67927510 ~ 67928146 (+) | True | G738835 |
| TU838993 | lncRNA | downstream | 67416 | 67990038 ~ 67992670 (+) | True | G738866 |
| TU839101 | lncRNA | downstream | 240772 | 68163394 ~ 68167095 (+) | False | G738972 |
| TU839104 | lncRNA | downstream | 240772 | 68163394 ~ 68167270 (+) | True | G738972 |
| XM_036986048.1 | mRNA | upstream | 136891 | 67759384 ~ 67769486 (+) | False | LOC110530969 |
| XM_036986049.1 | mRNA | upstream | 136891 | 67759384 ~ 67769486 (+) | True | LOC110530969 |
| XM_021613433.2 | mRNA | upstream | 179435 | 67693817 ~ 67726942 (+) | True | LOC110530410 |
| XM_036986043.1 | mRNA | upstream | 212735 | 67577846 ~ 67693642 (+) | False | LOC110530407 |
| XM_036986044.1 | mRNA | upstream | 212735 | 67577846 ~ 67693642 (+) | False | LOC110530407 |
| XM_021613468.2 | mRNA | downstream | 263285 | 68185907 ~ 68198975 (+) | False | LOC110530418 |
| XM_021613466.2 | mRNA | downstream | 263457 | 68186079 ~ 68198975 (+) | False | LOC110530418 |
| XM_021613467.2 | mRNA | downstream | 263516 | 68186138 ~ 68198975 (+) | True | LOC110530418 |
| XM_036986881.1 | mRNA | downstream | 552781 | 68475403 ~ 68506363 (+) | True | LOC118965633 |
| XM_021613481.2 | mRNA | downstream | 950815 | 68873437 ~ 68898424 (+) | True | LOC110530424 |
| TU838300 | other | upstream | 358768 | 67546129 ~ 67547609 (+) | True | G738244 |
| TU838049 | other | upstream | 674464 | 67231182 ~ 67231913 (+) | True | G738020 |
| TU837788 | other | upstream | 690748 | 67170467 ~ 67215629 (+) | True | G737783 |
| TU837166 | other | upstream | 1104297 | 66798573 ~ 66802080 (+) | False | G737234 |
| TU837167 | other | upstream | 1105317 | 66798573 ~ 66801060 (+) | True | G737234 |
| TU839857 | other | downstream | 935761 | 68858383 ~ 68858753 (+) | True | G739648 |
| TU839882 | other | downstream | 980743 | 68903365 ~ 68906965 (+) | True | G739670 |
| TU839922 | other | downstream | 1081715 | 69004337 ~ 69005116 (+) | True | G739708 |
| TU841127 | other | downstream | 1613778 | 69536400 ~ 69538276 (+) | True | G740827 |
| TU842479 | other | downstream | 2703599 | 70626221 ~ 70626744 (+) | True | G742095 |
