RNA id: XM_036986061.1


Basic Information

Item Value
RNA id XM_036986061.1
length 1460
RNA type mRNA
GC content 0.52
exon number 4
gene id LOC110530431
representative True

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 69135571 ~ 69148676 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

TTGTCTAAAGTGCTTTCATGTGAATTAGGTACGCATCAACTGCAGAGTTAAATTTAGGACAATACGCACCACGACCTACCCCAAATCATTACAATGGAGACCTGTTATCGCACACTTTGGATGACAGTTGTTCTGGCATTGATTACGCGGAGATCAGCCGCGGTAGGGCCGGTTATCCGGTGTGAACCTTGTGATGCTGGAGCCCGGCTCCTCTGCAAGCCGTTGCCCAAGGACTGCACCGAGAGAGTTCGCGAAACTGGCTGCGGGTGCTGCATGACTTGCGCGCTGGCATTTGGACAGCCGTGCGGGGTGTACACCGGGAGATGTGGCTCCGGGATGGCATGCCAGCAGCAGCCCGGCGAGACGAAACCTCTCCAAGCTCTGCTGGAAGGACGAGGACAGTGTGCGATTGCAACCATTAAAAGATCCACCGCCGCTTTACCTGCCGTCAATGAGATACAAGAGAATGTGGGTGGTACTCAGGAGGAGGAGCAAAACACCACCGCCCCAGTGATCCAAGCCCCCCAAGCCCTTTTCAGCACCAGCAGACCTCCTGTAGGCCCCCCCAGACTCCCCCACcacacctctctcctccaccctgtcAAGGCAGTGGTCATCCACAGGGAGCAGCTGAAGAGGGCCCGGAGCTACAAAATGGAGGAACTCCCTGGAGCTCACAGCACAGACCAACAGAACTTCTCCCTGGAATCCAAGCAGGAGCCAGAGTATggtccctgtcttagagagatggagagtgtcCTCAAAGGACTGAAGATCACAGACATCCTCAACCCCAGAGGCTTCCACATCCCAAACTGTGACAATAAGGGCTTCTACAAAAAGAAACAGtgccgtCCATCCAAGGGCAGAAAGCGAGGGTTTTGCTGGTGTGTCGACAAGTATGGGCAGCCATTGCCAAGTTTCaacgggaaggagagaggagacaccCAGTGCTACAACTCTGAGAGCCAATAAGACCTGAGCAGCAAgaaggaaccagagagagagagagagaggcggagagaaagaaaagggagCCATGAACACACAGAAAAACTATGAGGATATTGGGATCCAAAAGGGTCCAAAATGGCTGGGCCTGGACGTGTTGGCTGGCATTGATGATACTTCGGCCAACAGGAAGGCAGGGCAGGAGGATGGAAGGCAGGGCAGGAGGAGTGGCTTGAGAAGAGGACTCATCCAATCACACTCCTTGTGTCCAACACACACTCTCCAATGCTATGTGCTGCTCCTGTAAGCAGTGTGTGGATGGATTCTCCATAGACAGAGGGCAGTACTTCTAAGGACAAATTAGATAATTAATTCCATTGCAGAGGCCTAGCCTTGATGATTACAGACTTGATGACAGAGACTTATATACAGTAATTCTGTATGTTtgatatgttactgtatgtatttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg

Function

GO:

id name namespace
GO:0001558 regulation of cell growth biological_process
GO:0005576 extracellular region cellular_component
GO:0005520 insulin-like growth factor binding molecular_function

KEGG:

id description
K10138 IGFBP3; insulin-like growth factor-binding protein 3

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU839967 lncRNA upstream 16450 69117563 ~ 69119121 (+) True G739748
TU839960 lncRNA upstream 89699 69045602 ~ 69045872 (+) True G739746
TU839924 lncRNA upstream 131441 69003517 ~ 69004130 (+) True G739710
TU839950 lncRNA upstream 134945 69000171 ~ 69000626 (+) True G739736
TU839949 lncRNA upstream 136183 68999172 ~ 68999388 (+) True G739735
TU840044 lncRNA downstream 32837 69181513 ~ 69192634 (+) True G739821
TU840042 lncRNA downstream 33440 69182116 ~ 69182446 (+) True G739819
TU840163 lncRNA downstream 226448 69375124 ~ 69375357 (+) True G739932
TU840164 lncRNA downstream 226875 69375551 ~ 69375818 (+) True G739933
TU840165 lncRNA downstream 227256 69375932 ~ 69376131 (+) True G739934
XM_036986060.1 mRNA upstream 18576 69046411 ~ 69116995 (+) False LOC110530428
XM_036986059.1 mRNA upstream 18576 69048709 ~ 69116995 (+) True LOC110530428
XM_021613485.2 mRNA upstream 89975 69019200 ~ 69045596 (+) False LOC110530427
XM_021613486.2 mRNA upstream 89975 69019209 ~ 69045596 (+) True LOC110530427
XR_002474334.2 mRNA upstream 128963 69005246 ~ 69006608 (+) True LOC110529135
XM_021613491.2 mRNA downstream 114846 69263522 ~ 69354693 (+) False LOC110530432
XM_021613492.2 mRNA downstream 114846 69263522 ~ 69354693 (+) False LOC110530432
XM_036986064.1 mRNA downstream 146162 69294838 ~ 69354693 (+) False LOC110530432
XM_021613489.2 mRNA downstream 146227 69294903 ~ 69354693 (+) False LOC110530432
XM_021613490.2 mRNA downstream 146227 69294903 ~ 69354693 (+) False LOC110530432
TU839922 other upstream 130455 69004337 ~ 69005116 (+) True G739708
TU839882 other upstream 228606 68903365 ~ 68906965 (+) True G739670
TU839857 other upstream 276818 68858383 ~ 68858753 (+) True G739648
TU838937 other upstream 1212949 67906377 ~ 67922622 (+) True LOC110530413
TU838300 other upstream 1587962 67546129 ~ 67547609 (+) True G738244
TU841127 other downstream 387724 69536400 ~ 69538276 (+) True G740827
TU842479 other downstream 1477545 70626221 ~ 70626744 (+) True G742095
TU843350 other downstream 2546926 71695602 ~ 71706542 (+) False G742860
TU843344 other downstream 2555967 71704643 ~ 71715616 (+) False G742860
TU843351 other downstream 2555967 71704643 ~ 71715616 (+) False G742860

Expression Profile