Gene
RNA
| Item | Value |
|---|---|
| RNA id | LOC110530978 |
| length | 853 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 5 |
| gene id | LOC110530978 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 73182170 ~ 73187819 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0046872 | metal ion binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU845733 | lncRNA | upstream | 113 | 73180581 ~ 73182057 (+) | True | G745054 |
| TU845729 | lncRNA | upstream | 6635 | 73175181 ~ 73175535 (+) | True | G745050 |
| TU845713 | lncRNA | upstream | 31568 | 73150300 ~ 73150602 (+) | True | G745037 |
| TU845712 | lncRNA | upstream | 32593 | 73149239 ~ 73149577 (+) | True | G745036 |
| TU845711 | lncRNA | upstream | 33848 | 73148076 ~ 73148322 (+) | True | G745035 |
| TU845741 | lncRNA | downstream | 39405 | 73227224 ~ 73308294 (+) | True | G745061 |
| TU845745 | lncRNA | downstream | 39825 | 73227644 ~ 73228429 (+) | True | G745064 |
| TU845804 | lncRNA | downstream | 133461 | 73321280 ~ 73322029 (+) | True | G745122 |
| TU845972 | lncRNA | downstream | 176988 | 73364807 ~ 73365138 (+) | True | G745271 |
| TU845979 | lncRNA | downstream | 182562 | 73370381 ~ 73371047 (+) | False | G745278 |
| XM_036986164.1 | mRNA | upstream | 20051 | 73120837 ~ 73162119 (+) | False | mmp16b |
| XM_036986167.1 | mRNA | upstream | 20857 | 73120829 ~ 73161313 (+) | False | mmp16b |
| XM_036986165.1 | mRNA | upstream | 20857 | 73120831 ~ 73161313 (+) | False | mmp16b |
| XM_036986166.1 | mRNA | upstream | 20857 | 73120832 ~ 73161313 (+) | False | mmp16b |
| XR_005052946.1 | mRNA | upstream | 206179 | 72951202 ~ 72975991 (+) | False | LOC110530509 |
| XM_021613667.2 | mRNA | downstream | 36352 | 73224171 ~ 73227167 (+) | False | samd13 |
| XM_021613669.2 | mRNA | downstream | 36440 | 73224259 ~ 73227167 (+) | True | samd13 |
| XM_036986854.1 | mRNA | downstream | 99432 | 73287251 ~ 73290541 (+) | True | LOC110530979 |
| XM_021613673.2 | mRNA | downstream | 126172 | 73313991 ~ 73320557 (+) | False | LOC110530519 |
| XM_021613672.2 | mRNA | downstream | 126486 | 73314305 ~ 73320557 (+) | True | LOC110530519 |
| TU845309 | other | upstream | 309866 | 72860408 ~ 72872304 (+) | True | LOC110530507 |
| TU845352 | other | upstream | 313788 | 72867101 ~ 72868382 (+) | True | G744697 |
| TU845350 | other | upstream | 317467 | 72862256 ~ 72864703 (+) | True | G744696 |
| TU844866 | other | upstream | 539432 | 72634884 ~ 72642738 (+) | True | LOC110530502 |
| TU844905 | other | upstream | 626614 | 72542726 ~ 72555556 (+) | False | LOC110530976 |
| TU845764 | other | downstream | 61605 | 73249424 ~ 73250496 (+) | True | G745083 |
| TU846133 | other | downstream | 405818 | 73593637 ~ 73595238 (+) | True | G745410 |
| TU846223 | other | downstream | 531897 | 73719716 ~ 73720650 (+) | True | G745489 |
| TU846883 | other | downstream | 1764866 | 74952685 ~ 74953654 (+) | False | G746052 |
| TU846909 | other | downstream | 1826825 | 75014644 ~ 75033896 (+) | False | nedd8 |
