Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021613871.2 |
| length | 960 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 8 |
| gene id | LOC110530654 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 76390062 ~ 76406519 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0006730 | one-carbon metabolic process | biological_process |
| GO:0008270 | zinc ion binding | molecular_function |
| GO:0004089 | carbonate dehydratase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU849147 | lncRNA | upstream | 153517 | 76236345 ~ 76236545 (+) | True | G747979 |
| TU849133 | lncRNA | upstream | 162634 | 76227209 ~ 76227428 (+) | True | G747965 |
| TU848816 | lncRNA | upstream | 177998 | 76210676 ~ 76212064 (+) | True | LOC110530649 |
| TU848856 | lncRNA | upstream | 188954 | 76200908 ~ 76201108 (+) | True | G747730 |
| TU848853 | lncRNA | upstream | 192555 | 76196390 ~ 76197507 (+) | True | G747728 |
| TU849404 | lncRNA | downstream | 25465 | 76431984 ~ 76432222 (+) | True | G748224 |
| TU849422 | lncRNA | downstream | 34774 | 76441293 ~ 76441507 (+) | True | G748242 |
| TU849424 | lncRNA | downstream | 37575 | 76444094 ~ 76444298 (+) | True | G748244 |
| TU849470 | lncRNA | downstream | 72329 | 76478848 ~ 76479172 (+) | True | G748289 |
| TU849471 | lncRNA | downstream | 73594 | 76480113 ~ 76480344 (+) | True | G748290 |
| XM_021613869.2 | mRNA | upstream | 12264 | 76365091 ~ 76377798 (+) | True | LOC110530652 |
| XM_036986282.1 | mRNA | upstream | 63519 | 76321125 ~ 76326543 (+) | True | LOC110530653 |
| XM_021613865.2 | mRNA | upstream | 130154 | 76245705 ~ 76259908 (+) | True | LOC110530650 |
| XM_021613864.2 | mRNA | upstream | 178163 | 76210540 ~ 76211899 (+) | False | LOC110530649 |
| XM_036986280.1 | mRNA | upstream | 288568 | 76073713 ~ 76101494 (+) | False | LOC110530646 |
| XR_002474337.2 | mRNA | downstream | 16597 | 76423116 ~ 76425061 (+) | True | LOC110529140 |
| XM_021613872.2 | mRNA | downstream | 44703 | 76451222 ~ 76453376 (+) | False | LOC110530655 |
| XM_036986283.1 | mRNA | downstream | 120291 | 76526810 ~ 76720528 (+) | False | LOC110530656 |
| XM_036986284.1 | mRNA | downstream | 120291 | 76526810 ~ 76720528 (+) | False | LOC110530656 |
| XM_036986285.1 | mRNA | downstream | 120293 | 76526812 ~ 76647539 (+) | False | LOC110530656 |
| TU848805 | other | upstream | 274076 | 76115693 ~ 76115986 (+) | True | G747680 |
| TU847964 | other | upstream | 1006934 | 75379502 ~ 75383128 (+) | False | G746951 |
| TU847837 | other | upstream | 1032905 | 75350208 ~ 75357157 (+) | False | LOC110530987 |
| TU847942 | other | upstream | 1061867 | 75327772 ~ 75328195 (+) | True | G746936 |
| TU846907 | other | upstream | 1356166 | 75031930 ~ 75033896 (+) | True | nedd8 |
| TU849434 | other | downstream | 45051 | 76451570 ~ 76452437 (+) | True | LOC110530655 |
| TU849632 | other | downstream | 300211 | 76706730 ~ 76707644 (+) | False | G748432 |
| TU850161 | other | downstream | 744144 | 77150663 ~ 77177349 (+) | True | G748905 |
| TU850174 | other | downstream | 772825 | 77179344 ~ 77180128 (+) | True | G748917 |
| TU850224 | other | downstream | 860133 | 77266652 ~ 77272660 (+) | True | G748959 |
