RNA id: TCONS_00035368


Basic Information

Item Value
RNA id TCONS_00035368
length 1022
RNA type mRNA
GC content 0.45
exon number 2
gene id XLOC_017923
representative True

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 9751743 ~ 9760424 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

aggtgtTTTATGGTTGATAAAGACCAGGCTGAAGTCAATGCCATCCGTAAGGTGTTCAACGAGTCAGACATTCTCCTTTGTTGGTACCATGTAACGCAAGCAGTAACTCGTTGGCTGTCAATATCTGAATCTGGTGTGAATGGACCTGAAAAGACAGATTCAAGAGCGCACATCATACAGTTTATGTCAGAGATGAAATGCTGTTCAAAGGTGTGTTGCTAtttgttttagggtgctttcacacctatacttttgtttcagaacctgtcttgtttgcccagttagcgcggttcgtttggcatatgtgaacaaggCAATTGCGCTCTAttccacgccaaagtaatcgctccgagaccgcctgagtgaggtagtctcggcttgattgaaacgaaccctggagtggttcgtttgcagtgagaaagcgatccgatccgagcacggttattacagtgttttatggatatgtgataggcatacggctatatgaagagagaattatgagtagggtgggaagtttcgcaagtctccggatgcccgaaAACGAGTGATGACCTCCCCGTAATCTCGCATcaccctcccggtcctcaaataggcatcgtcgcgcacccttctcacccctccccaccgcatctctcctcagacacgtcgcgcgtgcGCGCCtcgtcaatcaccaccaaaccaccacctccccctgacagctgagcagaaCGCTGCAAAAAAAACCCTggcactctgaccaatgtgaggagagtttactcgcacttGACTTGtattagctcttttggtccgattagaaattTTGCAGTctgaaagtgaaccgctccaagagcaaagagcaacaatgttaacatttttaatctCTTTTTCGGAACAACtaaatcaattcacaggtgtgaaagcacccttatagtACAATTGTATGTTCTAATGTGTCATTCTACTTTGGTAACAAGCTTGTAACATGCATTATTAATATGTGAAAAAATTATGTTAATGACAGCTAATATAAAATGGTAACCACA

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-040724-17 No description available

Ensembl:

ensembl_id ENSDART00000152498

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00035348 lncRNA downstream 918978 8794502 ~ 8835094 (-) True XLOC_017914
TCONS_00035342 lncRNA downstream 1432758 8122693 ~ 8321314 (-) False XLOC_017913
TCONS_00036797 lncRNA downstream 1800890 7951782 ~ 7953182 (-) True XLOC_017909
TCONS_00036796 lncRNA downstream 2115420 7612155 ~ 7638652 (-) False XLOC_017907
TCONS_00036795 lncRNA downstream 2542876 7191883 ~ 7211196 (-) True XLOC_017904
TCONS_00036798 lncRNA upstream 321611 10077157 ~ 10078215 (-) True XLOC_017930
TCONS_00035378 lncRNA upstream 358482 10114028 ~ 10117997 (-) True XLOC_017931
TCONS_00035381 lncRNA upstream 592237 10347783 ~ 10399176 (-) False XLOC_017933
TCONS_00035380 lncRNA upstream 592237 10347783 ~ 10422813 (-) True XLOC_017933
TCONS_00036799 lncRNA upstream 1223912 10979458 ~ 10992289 (-) True XLOC_017935
TCONS_00035363 mRNA downstream 79195 9643884 ~ 9674877 (-) False XLOC_017922
TCONS_00035362 mRNA downstream 95667 9643499 ~ 9658405 (-) False XLOC_017922
TCONS_00035361 mRNA downstream 173626 9575374 ~ 9580446 (-) True XLOC_017921
TCONS_00035360 mRNA downstream 291623 9428966 ~ 9462449 (-) True XLOC_017920
TCONS_00035359 mRNA downstream 317551 9428966 ~ 9436521 (-) False XLOC_017920
TCONS_00035369 mRNA upstream 20844 9776390 ~ 9780917 (-) False XLOC_017924
TCONS_00035372 mRNA upstream 202960 9958506 ~ 9963713 (-) True XLOC_017926
TCONS_00035373 mRNA upstream 215240 9970786 ~ 9980318 (-) True XLOC_017927
TCONS_00035375 mRNA upstream 302204 10057750 ~ 10065130 (-) True XLOC_017929
TCONS_00035376 mRNA upstream 343044 10098590 ~ 10118818 (-) False XLOC_017931
TCONS_00035364 other downstream 103010 9644065 ~ 9651062 (-) True XLOC_017922
TCONS_00035349 other downstream 817068 8936903 ~ 8937004 (-) True XLOC_017915
TCONS_00035340 other downstream 1335015 8122693 ~ 8419057 (-) False XLOC_017913
TCONS_00035337 other downstream 1759988 7986950 ~ 7994084 (-) True XLOC_017910
TCONS_00035333 other downstream 2124801 7612282 ~ 7629271 (-) True XLOC_017907
TCONS_00035370 other upstream 21633 9777179 ~ 9780867 (-) True XLOC_017924
TCONS_00035371 other upstream 150722 9906268 ~ 9906384 (-) True XLOC_017925
TCONS_00035374 other upstream 297859 10053405 ~ 10053701 (-) True XLOC_017928
TCONS_00035387 other upstream 2850172 12605718 ~ 12607421 (-) True XLOC_017943
TCONS_00035389 other upstream 3264943 13020489 ~ 13140227 (-) False XLOC_017951

Expression Profile

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