Item | Value |
---|---|
RNA id | TU859349 |
length | 365 |
lncRNA type | sense_over |
GC content | 0.53 |
exon number | 2 |
gene id | vipr1a |
representative | False |
Item | Value |
---|---|
chromosome id | NC_048572.1 |
NCBI id | CM023226.2 |
chromosome length | 91622588 |
location | 85532159 ~ 85638054 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
species | rainbow trout (Oncorhynchus mykiss) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU859371 | lncRNA | upstream | 25259 | 85553424 ~ 85607980 (+) | True | G756532 |
TU859376 | lncRNA | upstream | 71913 | 85560343 ~ 85561326 (+) | True | G756536 |
TU859358 | lncRNA | upstream | 97154 | 85535429 ~ 85536085 (+) | True | G756520 |
TU859337 | lncRNA | upstream | 143380 | 85489250 ~ 85489859 (+) | False | G756506 |
TU859338 | lncRNA | upstream | 143380 | 85489250 ~ 85489859 (+) | True | G756506 |
TU860175 | lncRNA | downstream | 606 | 85634533 ~ 85637305 (+) | False | vipr1a |
TU860173 | lncRNA | downstream | 1637 | 85635564 ~ 85637305 (+) | False | vipr1a |
TU860181 | lncRNA | downstream | 1637 | 85635564 ~ 85638039 (+) | True | vipr1a |
TU860193 | lncRNA | downstream | 8940 | 85642867 ~ 85643079 (+) | True | G757220 |
TU860199 | lncRNA | downstream | 13681 | 85647608 ~ 85647840 (+) | True | G757226 |
LOC110530830 | mRNA | upstream | 14912 | 85617604 ~ 85618327 (+) | True | LOC110530830 |
XM_021614116.2 | mRNA | upstream | 108000 | 85511382 ~ 85525239 (+) | False | klhl40a |
XR_005052987.1 | mRNA | upstream | 108000 | 85511382 ~ 85525239 (+) | True | klhl40a |
XM_036986614.1 | mRNA | upstream | 127347 | 85474107 ~ 85505892 (+) | False | hhatla |
XM_021614113.2 | mRNA | downstream | 24673 | 85658600 ~ 85663057 (+) | True | LOC110530829 |
XM_021614110.2 | mRNA | downstream | 56593 | 85690520 ~ 85708770 (+) | True | LOC110530827 |
XM_036986893.1 | mRNA | downstream | 75727 | 85709654 ~ 85713206 (+) | True | LOC118965641 |
XM_021614109.2 | mRNA | downstream | 105078 | 85739005 ~ 85760958 (+) | True | LOC110530826 |
XM_036986618.1 | mRNA | downstream | 159073 | 85793000 ~ 85881217 (+) | True | LOC110531032 |
TU859221 | other | upstream | 369146 | 85256782 ~ 85264093 (+) | True | LOC118965572 |
TU859074 | other | upstream | 695495 | 84936066 ~ 84937744 (+) | False | G756298 |
TU859075 | other | upstream | 696092 | 84936066 ~ 84937147 (+) | False | G756298 |
TU859041 | other | upstream | 755160 | 84876994 ~ 84878079 (+) | True | G756271 |
TU858875 | other | upstream | 1071348 | 84558786 ~ 84561891 (+) | True | G756134 |
TU860498 | other | downstream | 318041 | 85951968 ~ 86028274 (+) | True | G757472 |
TU860712 | other | downstream | 483736 | 86117663 ~ 86117948 (+) | True | G757663 |
TU860829 | other | downstream | 596424 | 86230351 ~ 86231459 (+) | True | G757754 |
TU860993 | other | downstream | 897226 | 86531153 ~ 86532379 (+) | True | G757902 |
TU861161 | other | downstream | 1000857 | 86634784 ~ 86635460 (+) | True | G758045 |