RNA id: TU864974



Basic Information


Item Value
RNA id TU864974
length 461
RNA type TUCP
GC content 0.51
exon number 3
gene id ndufb3
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 90737231 ~ 90743084 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


GACGTACTAAGTGTGGTCTCTTTTGTGTACCGTAGCAGTGCCGTACATCAGATGCAATTGTCGAAGTGCTTCATCCACAACAGAGGTCACAAACAGACAGGATGGGAGGAGAACACGGCAGTAAATTAAACCTGCCAGACTTTAAGCAGTGGAAGGTCGAGGGAACGCCTCTGGAGTTCACACAGCAGAGGCTGGCAGCTAGAGGACTGAAGGACCCATGGGcacgTAACGAGGTGTGGAGGTACGTGGGAGGCTTCAGTCGTCCTGTATCCCTGGGAGACGTGATGCTGAGGGGCTTTAAATGGGGCTTTGCTGCCTTCGCTGTGGCTCTGACTGTAGAGTACGCTCTCTTCCCCCCAAAGAAGTCTGACCACTGACCTCTAACCCCAGAACGCTTCGGAACATGACCGGATCACATGTTTTTTCTGTATAATAAATGTTGAGTGTTTTCATCCACTAAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU864997 lncRNA upstream 4903 90730990 ~ 90732388 (+) True G760872
TU864996 lncRNA upstream 7750 90728529 ~ 90729541 (+) True G760871
TU864967 lncRNA upstream 44247 90692425 ~ 90693044 (+) True G760844
TU864960 lncRNA upstream 75778 90661231 ~ 90661513 (+) True G760837
TU864955 lncRNA upstream 79173 90657807 ~ 90658118 (+) True G760832
TU865014 lncRNA downstream 62056 90805140 ~ 90805628 (+) True G760886
TU865015 lncRNA downstream 62546 90805630 ~ 90862789 (+) True G760887
TU865020 lncRNA downstream 75591 90818675 ~ 90824470 (+) True G760892
TU865022 lncRNA downstream 87857 90830941 ~ 90831758 (+) True G760894
TU865455 lncRNA downstream 135211 90878295 ~ 90878639 (+) True G761221
XM_036986785.1 mRNA upstream 1178 90721147 ~ 90736113 (+) False pecr
XM_036986784.1 mRNA upstream 9210 90721154 ~ 90728081 (+) True pecr
XM_021614166.2 mRNA upstream 27513 90700188 ~ 90709778 (+) False LOC110530875
XM_036986780.1 mRNA upstream 62427 90658311 ~ 90674864 (+) False zgc:162816
XM_036986778.1 mRNA upstream 62427 90658313 ~ 90674864 (+) False zgc:162816
XR_005053010.1 mRNA downstream 36039 90779123 ~ 90785701 (+) False LOC110530867
XM_021614155.2 mRNA downstream 36168 90779252 ~ 90796938 (+) True LOC110530867
XM_036986791.1 mRNA downstream 56904 90799988 ~ 90830525 (+) True LOC110530865
XM_036986792.1 mRNA downstream 170689 90913773 ~ 90916737 (+) True LOC110530903
XM_036986799.1 mRNA downstream 496802 91239886 ~ 91260968 (+) True rgs20
TU864957 other upstream 27639 90700295 ~ 90709652 (+) True LOC110530875
TU864805 other upstream 336819 90396922 ~ 90400472 (+) True G760718
TU864778 other upstream 348214 90374087 ~ 90389077 (+) False G760718
TU864640 other upstream 528332 90160270 ~ 90208959 (+) False G760623
TU864637 other upstream 528332 90161314 ~ 90208959 (+) True G760623
TU864981 other downstream 27033 90770117 ~ 90771037 (+) True G760857
TU865491 other downstream 209908 90952992 ~ 90955079 (+) False G761244
TU865499 other downstream 209908 90952992 ~ 90955079 (+) False G761244
TU865506 other downstream 209908 90952992 ~ 90955079 (+) False G761244
TU865509 other downstream 209908 90952992 ~ 90955079 (+) False G761244

Expression Profile